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Showing 4 open source projects for "miranda"

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  • 1

    CupidTool

    Cupid: simultaneous reconstruction of miRNA-target and ceRNA networks

    ...We showed that our integrative approach significantly improves on miRNA-target prediction accuracy as assessed by both mRNA and protein level measurements in breast cancer cell lines. Cupid is implemented in 3 steps: Step 1: re-evaluate candidate miRNA binding sites in 3’ UTRs, as inferred by TargetScan, miRanda and PITA by integrating their scores, location in the 3’ UTR, and cross-species conservation. Step2: interactions are predicted by integrating information about selected sites, their multiplicity, and the statistical dependency between the expression profiles of miRNA and putative targets. Likelihoods for each predictive feature are computed based on a positive gold standard set. ...
    Downloads: 3 This Week
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  • 2
    Russian Translation for Miranda-IM by main russian translators of Miranda-IM
    Downloads: 0 This Week
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  • 3
    simplylexer: this piece of code will allow you to use higlight (c/c++) sintax in differnt (Phorum) forums from your favorite IDE (vc++ 6/03/05, codeblocks, dev-cpp, builder 6, ..) and now you can send highlighted messages from Miranda IM with tabsrmm.
    Downloads: 0 This Week
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  • 4
    The original project developers have moved to: http://www.sourceforge.net/projects/evros A new attempt will be started here, but don't expect anything for a while.
    Downloads: 0 This Week
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