Search Results for "kinetics"

OpenFOAM - The Open Source CFD Toolbox. OpenFOAM is a generic, programmable software tool for Computational Fluid Dynamics (CFD). For more information, see: - Main Website: https://openfoam.org - C++ Source Documentation: https://cpp.openfoam.org - Issue (Bug) Tracking: https://bugs.openfoam.org - User Guide: https://cfd.direct/openfoam/user-guide

A 3D Advection-Diffusion Equation Finite Element Method solver including a user's manual and a basic pre-proccessor.

Cantera is a suite of object-oriented software tools for problems involving chemical kinetics, thermodynamics, and/or transport processes. It can be used from MATLAB, Python, C++, or Fortran.

...The models in the ensemble can be categorized according to regulatory, stoichiometric, and physiological constraints and differ from each other on only a single aspect. We distinguish four groups of models: (1) flux balance models that only define reaction kinetics for substrate uptake and by-product excretion, (2) kinetic models without and (3) kinetic models with regulation on the metabolic and/or genetic level, and (4) resource allocation models.

cupSODA is a simulator of biological systems that exploits the remarkable memory bandwidth and computational capability of GPUs. cupSODA allows to efficiently execute in parallel large numbers of simulations, which are usually required to investigate the emergent dynamics of a given biological system under different conditions. cupSODA works by automatically deriving the system of ordinary differential equations from a reaction-based mechanistic model, defined according to the mass-action kinetics, and then exploiting the numerical integration algorithm, LSODA

...The claim of these tools is to facilitate the programming of simulations by providing routines to quickly generate: -display windows and input parameters -help to display the variation in the data as graphs -management of iterations Goal for the user: quickly programme his simulation. Requires knowledge of C language. Knowledge of gtk and cairo (for simple graphs) is not necessary. See examples. -sugar fermentation kinetics -parachute drop -cycle of a water tank heated by solar panels -curve of chase For your simulation, simply copy and adapt some lines corresponding explicit examples.