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Showing 24 open source projects for "package"
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DWSIM - Open Source Process Simulator
Simulate chemical processes using advanced thermodynamic models
DWSIM is an open source, CAPE-OPEN compliant chemical process simulator for Windows, Linux and macOS systems. Written in VB.NET and C#, DWSIM features a comprehensive set of unit operations, advanced thermodynamic models, support for reacting systems, petroleum characterization tools and a fully-featured graphical interface. DWSIM Pro is a commercial sibling of DWSIM built on top of open-source software. It offers extended features, comes with private support, and is accessible in the... -
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Simulation of Urban MObility
SUMO is a microscopic, multi-modal traffic simulation.
SUMO is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation. The code and the issue tracker can be found at https://github.com/eclipse-sumo/sumo/ The documentation can be found at https://sumo.dlr.de/docs/ -
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ALAMODE
Ab initio simulator for thermal transport and lattice anharmonicity
ALAMODE is designed for analyzing lattice anharmonicity and lattice thermal conductivity of solids. By using an external DFT package such as VASP and Quantum ESPRESSO, you can extract harmonic and anharmonic force constants straightforwardly with ALAMODE. Using the anharmonic force constants, you can also calculate lattice thermal conductivity from first principles. For more information about ALAMODE, please visit the following webpages: Documentation : http://alamode.readthedocs.io/en/latest/ git repository : https://github.com/ttadano/alamode -
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TexGen is a geometric textile modelling software package to be used for obtaining engineering properties of woven textiles and textile composites. Citing TexGen We would be grateful if you could acknowledge use of TexGen where appropriate and suggest using one of the following references: L P Brown and A C Long. "Modelling the geometry of textile reinforcements for composites: TexGen", Chapter 8 in "Composite reinforcements for optimum performance (Second Edition)", ed. ...
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pyCGNS
A Python package for CGNS
pyCGNS is now on github: https://pycgns.github.io/index.html https://github.com/pyCGNS/pyCGNS -
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pybrn is a Python package for the analysis of biochemical reaction networks. It provides basic model handling capabilities, import from SBML, analysis of conservation relations, steady state computation and model simulation.
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Condor GUI
GUI for managing and working with one or more HTCondor pools.
...It was developed at the Otto von Guericke University Magdeburg, Germany, to support the daily work using HTCondor. Version History: Version 0.9.3: - QDarkStyleSheet is an optional package now Version 0.9.2: - New layout of job file editor - Keyword arguments in job file editor - Linux compatibility -
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GMES
GMES is a free Python package for FDTD electromagnetic simulations.
GMES is a free finite-difference time-domain (FDTD) simulation Python package developed at GIST to model photonic devices. Its features include simulation in 1D, 2D, and 3D Cartesian coordinates, distributed memory parallelism on any system supporting the MPI standard, portable to any Unix-like system, variuos dispersive ε(ω) models, CPML absorbing boundaries and/or Bloch-periodic boundary conditions, and arbitrary material and source distributions. -
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pyMDMix
Molecular dynamics with aqueous-organic solvent mixtures
This python package aims to help people set up and analyze molecular dynamics simulations in aqueous-organic solvent mixtures. See D. Alvarez-Garcia et al. Journal of Medicinal Chemistry, 2014. -
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StochPy - Stochastistic modeling in Python - is an easy-to-use package, which provides several stochastic simulation algorithms and unique analysis techniques, which can be used for stochastic simulations of biochemical systems.
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GSI student toolbox is a software package made for teaching purposes. It allows you to perform seismic inversion using global sthocastic inversion method made within CERENA/CMRP. NOTE: you can perform the same operations done with GSI Student Toolbox with our newest software GEOMS2. You can download the beta release here: https://sourceforge.net/projects/geoms2/
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nevesim
NEVESIM is an event-driven neural simulation tool.
NEVESIM is a software package for event-driven simulation of networks of spiking neurons with a fast simulation core in C++, and a scripting user interface in the Python programming language. It supports simulation of heterogeneous networks with different types of neurons and synapses, and can be easily extended by the user with new neuron and synapse types. -
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Topographica
Simulation software for brain modelling
Topographica is a neural modeling package developed in a Human Brain Project grant from NIH. Topographica helps neuroscientists and computational scientists simulate and understand how topographic maps contribute to brain function. Topographica is now primarily maintained at github.com; see https://github.com/ioam/topographica for recent updates and releases. -
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ProSym
Software package that facilitates traffic simulation
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GemSIM is a software package for generating realistic simulated next-generation sequencing reads with quality score values. Both Illumina and Roche/454 reads (single or paired end) can be simulated using appropriate empirical error models.
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MIPGen
Simple Molecular Interaction Potential Generator in Python
Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome... -
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Sempy is a Python package for the solution of partial differential equations using the spectral element method.
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Spasmos is a Python package that allows scientists to simulate the dynamics of highly collisional plasmas using a number of numerical methods.
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Pydusa is a package for parallel programming using Python. It contains a module for doing MPI programming in Python. We have added parallel solver packages such as Parallel SuperLU for solving sparse linear systems.
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Henry is an interface for Taylor 1.4.3 package (A. Jorba & M. Zou) and was written for master thesis to compute N-body problems (in Poincare variables) and MEGNO stability factor. Work is supported by Krzysztof Gozdziewski.
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A package for preference handling and aggregation rules. A number of voting rules discussed in social choice literature have been implemented in order to study various properties of these rules in simulations with randomly generated preferences.
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Collection of wrappers for textile composite modelling package TexGen and a variation of structural FEA packages (baseline being Calculix) to allow extraction of 3D mechanical property data.
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Software package for stochastic and hybrid simulation of microtubule dynamics and the effects of anti-mitotic drugs and microtubule regulatory proteins.
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