Open Source MATLAB Simulation Software - Page 3

ATLAS mPBPK is a MATLAb-based tool for modeling and Simulation of minimal Physiology Based Pharmacokinetic (mPBPK) models of small and large molecules. The tool enables the users to perform: i) PK data visualization, ii) simulation, iii) parameter optimization, and iv) local sensitivity analysis (SA) of mPBPK models in a simple and efficient manner.

Anmech is a tool for symbolic calculations and mathematical modelling using Matlab. Its main functions are automated derivation of equations of motion of mechanical systems and derivation of system of differential equations with numeric parameters.

BRAHMS is a Modular Execution Framework for dynamical systems. It knits together independently-authored software modules implementing dynamical processes into an integrated system, and supervises the deployment and execution of that system.

This project is aimed at analysis of the bat's cochlear model for its echo location performance. It uses DSP and statistical/stochastic signal processing theory. Language: Matlab and C/C++

Bayesian Surprise Matlab toolkit is a basic toolkit for computing Bayesian surprise values given a large set of input samples. It is also useful as way of exploring surprise theory. For more information see also: http://ilab.usc.edu/

Blit contains a group of highly efficient iterative sparse solvers that can handle multiple right-hand-sides (i.e. block solvers). We will implement BLQMR, BLGMRES and other block algorithms in MATLAB, FORTRAN 90, C/C++, CUDA and OpenCL.

A collection of different methods for implementing in C++ polycrystalline growth for metals during annealing or recrystallization.

CMMFile is a fast and easy to use binary file exchange interface between c++, Mathematica and Matlab

Custom uav is a complete flight control system in development. The project includes everything required for unmanned flight.

A user-friendly interface for running simulations of the gene networks comprising the circadian clock. Modules allow the simulation of experimental protocols with just a few mouse clicks. Users can fine-tune simulations to suit their particular interests.

The CASP (Computational Auditory Signal Processing and Perception) model accounts for various aspects of simultaneous and non-simultaneous masking in human listeners. The model is implemented in the Matlab / Octave scripting language.

Copyright 2014 Alvin Stanescu, Software Engineering Chair @ Technische Universitaet Munchen Licensed under the Apache License, Version 2.0. Please refer to https://github.com/AlvinStanescu/ControllerTester/blob/master/README.md for further details.

CyberUnits is a cross-platform class library for rapid development of high-performance computer simulations in life sciences. It supports modelling for biomedical cybernetics and systems biology with Object Pascal.

A simulator for learning techniques for dynamic bayesian networks.

This project will create a user-friendly modeling system for studying animal social aggregations. The model codifies the a new hypothesis that the animal's state, kinematics, and the group's emergent properties are dynamically linked together, with each one affecting the others. The model will be constructed using Object-Oriented MatLab.

Extended Bioaccumulation Framework (ExBAF) is a tool for assessing bioaccumulation in foodwebs. Supports several bioaccumulation models and provides tools for analysis and visualization.

We recently extended Marcatili’s approximate analytical approach for the description of light propagation in rectangular waveguides to the regime of (silicon) high-index-contrast waveguides. This software is a Matlab implementation of the method.

Fast-DCM (Fast-DynamicCausalModelling) is an open-source addon for the SPM5 toolbox (http://www.fil.ion.ucl.ac.uk/spm/software/spm5/). It accelerates the estimation of Dynamic Causal Models.

FEMM procedures to analyse rotating machines.

Folder is a tool to simulate and analyse the development of structures in mechanically layered media during layer parallel shortening or extension. It includes a graphical user interface that allows for easy designing of complex geometrical models, defining material parameters (including linear and non-linear rheology), and specifying type and amount of deformation. It also includes a range of features that facilitate the visualization and examination of various relevant quantities e.g. velocities, stress, rate of deformation, pressure, and finite strain. Folder contains a separate application, which illustrates analytical solutions of growth rate spectra for buckling and necking of a single viscous layer. Check out the companion paper: doi:10.1016/j.jsg.2016.01.001

A graphical MatLab framework for estimating the parameters of, modeling and simulating static and dynamic linear and polynomial systems in the errors-in-variables context with the intent of comparing various estimation strategies.

GFtbox is a Matlab package for simulating biological growth of leaves, petals, and similar organs.

Gaussian Process model for fitting deterministic simulator output. Establish efficient and reliable likelihood optimization through hybridized DIRECT-BFGS and multi-start BFGS algorithms. Programming Language: Matlab.

HOT is a package of Matlab and Octave compatible functions that manage thermodynamic data for a wide range of species. Functions calculate almost all the most common thermodynamic quantities of mixtures. Python users may also want to look at PYroMat at https://chmarti1.github.io/PYroMat/index.html

Simulation of the heat transfer in a bar and a sphere (1D) using finite differences in Matlab. Authors: -Jheyson A. Mogollon R. - jheyson260@gmail.com -Luca Meinardo - lucameinardo@gmail.com -Angie Xiomara González - angiegduque@gmail.com Current Version: 2.0 Date: 30/05/2017