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SimThyr is a continuous simulation program for the human pituitary-thyroid feedback control system. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients.
openDLX is a DLX/MIPS ISA compatible pipeline simulator.
(Visit https://github.com/smetzlaff/openDLX for the latest development version or if You want to contribute.)
ParallelSim is a parallel processor simulator written in java.
...The output of simulation will vary from machine to machine depending upon the underlying hardware, for e.g., the timings will be different on a dual core and a quad core processor. Feel free to reach out to me if you have any suggestions or queries.
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DSPemu emule a digital signal processor TMS320F243, with console interface showing the registers and memory. With DSPemu is possible test algorithms such as Filter, FFT/IFFT. This can be integrate and used with a circuit simulator.