Search Results for "gnu science" - Page 5
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Showing 592 open source projects for "gnu science"
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pySimiam
Robot simulator inspired by Sim.I.Am
PySimiam is a robot simulator, created to follow the course "Control of Mobile Robots" offered at Coursera. The simulator models an arbitrary number of mobile robots in a 2D environment, each controlled by a arbitrary algorithm. -
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runjags
The 'runjags' R package and standalone JAGS extension module
This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A... -
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LOOS
Analyze molecular simulation data
LOOS is a light-weight object oriented software library for creating new tools for analyzing molecular simulation data, written in C++. The main design goal is to allow casual programmers to easily implement new analysis methods. THIS PAGE IS NO LONGER UPDATED. Please see https://github.com/GrossfieldLab/loos for all recent developments -
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GMES
GMES is a free Python package for FDTD electromagnetic simulations.
GMES is a free finite-difference time-domain (FDTD) simulation Python package developed at GIST to model photonic devices. Its features include simulation in 1D, 2D, and 3D Cartesian coordinates, distributed memory parallelism on any system supporting the MPI standard, portable to any Unix-like system, variuos dispersive ε(ω) models, CPML absorbing boundaries and/or Bloch-periodic boundary conditions, and arbitrary material and source distributions. GMES officially stands for GIST... -
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FERS is a simulator for common radar system designs. It supports both multistatic and monostatic radars,and both pulsed and CW systems. FERS processes an XML script file to produce output in a variety of formats.
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Econball
Equation of stock trading simplified to game of moving resizing balls
The econ theory is the value of buy and sell are usually equal, at whatever free market price at the time, so if we trade between 2 things, holding the total of those 2 equal eachother, then you can buy without anyone selling, or sell without anyone buying. Just change from one equal valued type to the other, and the total of all the A's and all the B's are scaled instantly to be the same amounts. Those who change to the majority side lose, and those who change to the minority side win,... -
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siccom
Spatial Interaction in Coral Reef Communities
The program allows the simulation of spatial dynamics in a benthic coral reef community under various environmental settings. Several coral species, with either massive or branching colony growth morphologies are implemented as individual colonies, which compete for space with each other as well as with macroalgae and algal turf. For more details on the first version of the program see also: Kubicek A, Muhando C, Reuter H (2012) Simulations of Long-Term Community Dynamics in Coral... -
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Moose
Multiscale Neuroscience and Systems Biology Simulator
Moose is the core of a modern software platform for the simulation of neural systems ranging from subcellular components and biochemical reactions to complex models of single neurons, large networks, and systems-level processes. We have moved Github.com. This should be your source for the latest version of the code. -
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JASA allows researchers in agent-based computational economics to write high-performance trading simulations using a number of different auction protocols. The software also provides base classes for implementing simple adaptive trading agents.
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JABM is a Java framework for building agent-based simulation models using a discrete-event simulation framework.
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pyMDMix
Molecular dynamics with aqueous-organic solvent mixtures
This python package aims to help people set up and analyze molecular dynamics simulations in aqueous-organic solvent mixtures. See D. Alvarez-Garcia et al. Journal of Medicinal Chemistry, 2014. -
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SFS_CODE (Selection on Finite Sites under COmplex Demographic Events) performs forward population genetic simulations under a general Wright-Fisher model with arbitrary demographic, selective, and mutational effects.
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Folder
Toolbox for modelling deformation in layered media in 2D
Folder is a tool to simulate and analyse the development of structures in mechanically layered media during layer parallel shortening or extension. It includes a graphical user interface that allows for easy designing of complex geometrical models, defining material parameters (including linear and non-linear rheology), and specifying type and amount of deformation. It also includes a range of features that facilitate the visualization and examination of various relevant quantities e.g.... -
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Collaborative infrastructure for Collaborative Product Development (manufacturing) within Extended and Virtual Enterprise.
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Systems Biology Simulation Core Library
Accurate and efficient Java library that simulates biological models
This project has been moved to https://github.com/draeger-lab/SBSCL. -
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An Octave / LUA scripting language project dedicated to modeling electric motors inside the "Finite Element Method Magnetics" (FEMM) 2-D simulation program. Created to design a motor that fits inside a car wheel, experimenting in many degrees of freedo
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Otanes
Otanes is a live TV simulator for Content-Centric Networking (CCN).
Otanes is a highly configurable component-based CCN simulator (based on OMNeT++ simulation environment) specifically optimized for live TV research activities. It has armed with EvalVid (a video quality evaluation toolset) to reconstruct the received video and evaluate QoS and QoE metrics. It has.introduced background traffic and traffic engineering capability as well. -
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Elements
A cross-platform tool for creating and editing custom weather files.
Elements is a free, open-source, cross-platform software tool for creating and editing custom weather files for building energy modeling. The goal of the project is to develop a comprehensive, integrated application suitable for handling all of the common tasks associated with weather files. -
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OptFerm
A computational platform to study fermentation processes
OptFerm is a computational platform for the simulation and optimization of fermentation processes. The aim of this project is to offer a platform-independent, user-friendly, open-source and extensible environment for Bioengineering process optimization that can be used to increase productivity. This tool is focused in optimizing a feeding trajectory to be fed into a fed-batch bioreactor and to calculate the best concentration of nutrients to initiate the fermentation. Also, contains a... -
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Analysis software for Nbody/SPH or SPH simulations (e.g. performed with Gadget II). See http://sourceforge.net/apps/wordpress/hyplot/about and http://sourceforge.net/apps/trac/hyplot/wiki for more information.
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Simox has moved to gitlab. Please update your URLs: https://gitlab.com/Simox/simox A platform-independent robot simulation, motion and grasp planning toolbox consisting of three modules: VirtualRobot to simulate and visualize robots, Saba the sampling-based motion planning library and GraspStudio for grasp planning.
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DuMuX
Porous-Media Simulator
DuMuX, DUNE for multi-{phase, component, scale, physics, ...} flow and transport in porous media, is a free and open-source simulator for flow and transport processes in porous media. It is based on the Distributed and Unified Numerics Environment DUNE, dune-project.org. Its main intention is to provide a sustainable and consistent framework for the implementation and application of model concepts, constitutive relations, discretizations, and solvers. It has been successfully applied to CO2... -
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QSapecNG is a Qt-based symbolic analysis program for linear analog circuits. In fact, it consists of two indipendently parts: the SapecNG framework engine, and the application gui QSapecNG.
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A toolkit in C++ and python to process both experimental and simulation data of colloidal particles. Includes among others * a multiscale particle tracking algorithm [1] whose C++ implementation is optimised for 3D confocal data. Python implementation is more versatile (2D and 3D data). * a Leica file reader, * Steindhard bond orientational order calculation * a VTK file writer 1. Leocmach, M. & Tanaka, H. A novel particle tracking method with individual particle size measurement...
