Showing 65 open source projects for "package installer linux"

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  • 1
    ngs-flow
    Flow Solver Package with different applications (laminar flows, heat driven flows) in 3D and 2D for Netgen/NGSolve
    Downloads: 0 This Week
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  • 2
    pyMDMix

    pyMDMix

    Molecular dynamics with aqueous-organic solvent mixtures

    This python package aims to help people set up and analyze molecular dynamics simulations in aqueous-organic solvent mixtures. See D. Alvarez-Garcia et al. Journal of Medicinal Chemistry, 2014.
    Downloads: 0 This Week
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  • 3
    StochPy
    StochPy - Stochastistic modeling in Python - is an easy-to-use package, which provides several stochastic simulation algorithms and unique analysis techniques, which can be used for stochastic simulations of biochemical systems.
    Downloads: 3 This Week
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  • 4
    JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de
    Downloads: 5 This Week
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  • 5

    WATSpackage

    R package for acoustic-assisted whale survey simulation

    WATS is an R package (>R2.15) whose main purpose is to run an individual-based simulation of an acoustically-assisted mark-recapture survey of whales Version 1.0 = for R2.15.x Version 1.01 = for R3.0.3+ For details see: Peel D, Miller BS, Kelly N, Dawson S, Slooten E and Double MC (2014) A simulation study of acoustic-assisted tracking of whales for mark-recapture surveys. PloSOne in press.
    Downloads: 0 This Week
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  • 6
    Photonics is a photon tracking Monte Carlo package, which calculates photon flux and time distributions in a heterogeneous medium surrounding a light source. The propagation medium and detector and light sources are highly customizable.
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  • 7
    Discrete Dipole Aproximation Project

    Discrete Dipole Aproximation Project

    Plugin orientated Discrete Dipole Approximation (DDA) Solver

    Discrete Dipole Approximation Project, is a software package designed to solve the Discrete Dipole Problem by the Discrete Dipole Approximation (DDA) method. This software is desgined to be plugin operated allowing for easy implimincation of new solver methods to improve the efficienty of the code. The plugin support also allow the program to write its output in multiple formats and structures defined by plugins.
    Downloads: 0 This Week
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  • 8

    Time-Evolving Block Decimation

    TEBD simulates the dynamics of entangled quantum many-body systems.

    Time-Evolving Block Decimation (TEBD) is a new method for efficiently simulating the dynamics of entangled quantum many-body systems. It is especially suited to one-dimensional systems governed by a Hamiltonian made of local interactions. Open Source TEBD is a package, written in Fortran 95, which allows one to simulate the entangled quantum dynamics of a one-dimensional system governed by a Hamiltonian made of local interactions using TEBD. Expectation values and correlation functions,...
    Downloads: 0 This Week
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  • 9
    NWFET-Lab

    NWFET-Lab

    NWFET-Lab: Nanowire device simulation package

    NWFET-Lab: Nanowire device simulation package. Copyright (c) 1995-2013 by Jose Maria Castelo and Klaus Michael Indlekofer. All rights reserved. Note: Special restrictions apply. See disclaimers below and within the distribution. (We are not affiliated in any way with companies/persons mentioned above. All brand names and trademarks are property of their respective owners.)
    Downloads: 0 This Week
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  • 10
    A simulation package for investigating the dynamics of complex controversy.
    Downloads: 0 This Week
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  • 11
    The h5mma package provides improved support for reading HDF5 files in Mathematica. It is significantly faster, more memory efficient and crash resilient than the built-in HDF5 reading support. h5mma has moved to BitBucket: https://bitbucket.org/simulationtools/h5mma
    Downloads: 0 This Week
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  • 12

    Topographica

    Simulation software for brain modelling

    Topographica is a neural modeling package developed in a Human Brain Project grant from NIH. Topographica helps neuroscientists and computational scientists simulate and understand how topographic maps contribute to brain function. Topographica is now primarily maintained at github.com; see https://github.com/ioam/topographica for recent updates and releases.
    Downloads: 3 This Week
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  • 13

    MCloudSim/NovaCloudSim

    a distributed cloud simulator written in Java

    MCloudSim(formerly called NovaCloudSim) is a simulator written in Java for geographically distributed clouds. The software is modified from CloudSim 3.0, which is an open source data center simulator. All functions of CloudSim are reserved, and our newly added files are in the package org.cloudbus.cloudsim.nova. MCloudSim has following characteristics: (1) The overlay protocol can be freely replaced, and we have already ported Pastry, Kadmelia, Chord from PeerSim; (2) A Petri-Net...
    Downloads: 0 This Week
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  • 14

    SPSens

    Stochastic parameter sensitivity analysis for chemical networks

    SPSens is a complete software package written in C that estimates parameter sensitivities for stochastic models of chemical and biochemical reaction networks using Monte Carlo (MC) stochastic simulations. It is possible to estimate sensitivities with respect to system parameters using the following algorithms: finite difference methods (crude monte carlo, common reaction path, coupled finite differences); likelihood ratio methods; and regularized pathwise derivatives. Additionally the...
    Downloads: 0 This Week
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  • 15
    GemSIM is a software package for generating realistic simulated next-generation sequencing reads with quality score values. Both Illumina and Roche/454 reads (single or paired end) can be simulated using appropriate empirical error models.
    Downloads: 0 This Week
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  • 16

    LIME

    LIME is a software tool for creating multiphysics simulation codes.

    The Lightweight Integrating Multiphysics Environment for coupling codes (LIME) is a small software package for creating multiphysics simulation codes. LIME is intended to be especially useful when separate computer codes (which may be written in any standard computer language) already exist to solve di fferent parts of a multiphysics problem. LIME provides the key high-level software (written in C++), a well defi ned approach (with example templates), and interface requirements to enable the...
    Downloads: 0 This Week
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  • 17
    A high-performance simulation package for sampling the chemical and reaction-diffusion master equations. Primarily intended for running stochastic simulations of microbial cells.
    Downloads: 0 This Week
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  • 18
    MIPGen

    MIPGen

    Simple Molecular Interaction Potential Generator in Python

    Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome...
    Downloads: 0 This Week
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  • 19
    Sempy
    Sempy is a Python package for the solution of partial differential equations using the spectral element method.
    Downloads: 1 This Week
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  • 20
    OOP simulation package of mechanical pulp and paper mill
    Downloads: 0 This Week
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  • 21
    breve is a free, open-source 3D multi-agent simulation package designed for simulating decentralized systems and artificial life.
    Downloads: 0 This Week
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  • 22
    simBio is a Java package to create biological models for biologist and others. Cardiac cell models are available.
    Downloads: 0 This Week
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  • 23
    HOT is a package of Matlab and Octave compatible functions that manage thermodynamic data for a wide range of species. Functions calculate almost all the most common thermodynamic quantities of mixtures. Python users may also want to look at PYroMat at https://chmarti1.github.io/PYroMat/index.html
    Downloads: 1 This Week
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  • 24
    Open-source CT/ Radiography simulation package. XRaySim works seamlessly with commercial CAD packages and performs highly detailed scan simulations, with virtual X-ray sources and detectors, simulating cracks/ inclusions etc. very easily
    Downloads: 3 This Week
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  • 25
    San Le's Free Comp. Fluid Dynamics
    SLFCFD stands for San Le's Free Computational Fluid Dynamics. It is a package of scientific software and graphical user interfaces for use in computational fluid dynamics. It is written in ANSI C and distributed under the terms of the GNU license.
    Downloads: 0 This Week
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