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http://loto.sourceforge.net/ hosts 4 projects of free software related to materials science and physics. They are loto, feram, compasses and xtalgrowth.
The software for systems biology/pharmacology modeling
...By this time, DBSolveOptimum has been successfully tested and applied for the development and analysis of both systems pharmacology and conventional PK/PD models of drugs. It is free for academic and industrial use.
http://www.ncbi.nlm.nih.gov/pubmed/20698988
The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities.
Design and development in this project is driven by the Consortium for Open Multiphysics.
Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT
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The aim of project is creating program environment for solving some integral equations, arising at solving mathematical problems of the diffraction theory.
Monte Carlo implementation for the "Mobile Charge Densities in Harmonic Oscillators" (MCDHO) Molecular Force Field for Numerical Simulations of Biological Systems