CyberUnits is a cross-platform class library for rapid development of high-performance computer simulations in life sciences. It supports modelling for biomedical cybernetics and systems biology with Object Pascal.
Biskit is a python library for structural bioinformatics research. It simplifies the analysis of macromolecular structures, protein complexes, and molecular dynamics trajectories and offers a platform for the rapid integration of external programs.
PLEASE NOTE: The Biskit source code as well as any later releases are now hosted on https://github.com/graik/biskit
The sourceforge repo is only kept here for reference.
The Open Reflective Component Architecture , ORCAN, is designed to build the basis for a rapid incorporation of existing software packages into large-scale software projects Project is dead, however - please feel free to check and reuse code!
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HealthCareSim is an SDK for rapid modeling and simulating care delivery systems using the discrete event simulation paradigm. A modular design and useful defaults will enable a Java developer to quickly build prototype models that can be extended.
Simulator for large neuronal networks using leaky INF as its basic element. Simple few line scripts will enable rapid creation of large networks with different connectivities. Aimed at researchers interested in quickly testing large networks of neurons.