Search Results for "mathematical"
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Showing 43 open source projects for "mathematical"
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Library for ion optics, plasma extraction and space charge dominated ion beam transport.
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SimulaBeta
A simulation program for insulin-glucose homeostasis.
SimulaBeta is a simulation program for insulin-glucose feedback control. It is based on a nonlinear MiMe-NoCoDI model. -
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SimulAdren
A simulation program for the HPA axis.
SimulAdren is a simulation program for the hypothalamus-pituitary-adrenal axis (HPA feedback control). It is based on a nonlinear MiMe-NoCoDI model and uses the CyberUnits Bricks class library. -
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MathLabTool
math,simulation,graphics
Provide convenient tools for mathematical related experiment, simulation, graphics and other requirements. -
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CAELinux
Dedicated to computer-aided engineering Linux distribution
...Based on Ubuntu, it features a ready to use workstation environment for open source product development, makers and scientist with many CAD/CAM/CAE applications for mechanical design, stress analysis, heat transfer, flow simulation and CNC manufacturing / 3D printing as well as electronic design tools and a complete development environment for scientific computing & mathematical modeling. A special focus of CAELinux is to provide simplified interfaces to facilitate the use of specialized open source software while providing high performance parallel multiphysics solvers ready to use for more advanced users. Try CAELinux or carry it with you on a USB stick in a live environment or install it to turn your PC into a full fledged Ubuntu based CAE workstation. ... -
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DBSolveOptimum
The software for systems biology/pharmacology modeling
DBSolveOptimum is a stand-alone software tool for the construction and analysis of mathematical models of biological systems. It is a succession and extension of DBSolve 5 and DBSolve 7, which were popular tools for systems biology. In addition to the capabilities of these software packages, DBSolveOptimum is implemented with new tools for extended data analysis and multiple simulations, which are important for simulation of virtual clinical trials and application of modern modeling techniques, like quantitative systems pharmacology, to problems arising in drug research and development. ... -
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CBMPy
PySCeS Constraint Based Modelling
...Its architecture is both extensible and flexible using data structures that are intuitive to the biologist while transparently translating these into the underlying mathematical structures. . CBMPy implements popular analyses such as FBA, FVA, element/charge balancing, network analysis and model editing as well as advanced methods developed for the ecosystem modelling. CBMPy supports user interaction via: - interactive console or as a library for advanced use - GUI, visual representation of the model, analysis methods - a SOAP based webAPI exposes high level functionality via web services -
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BioModels Database is a data resource that allows biologists to store, search and retrieve published mathematical models of biological interests. Models presented are annotated and linked to relevant data resources and are available in various format
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ADiGator
A MATLAB Automatic Differentiation Tool
ADiGator is a source transformation via operator overloading tool for the automatic differentiation of mathematical functions written in MATLAB. Given a user written file, together with information on the inputs of said file, ADiGator uses forward mode automatic differentiation to generate a new file which contains the calculations required to compute the numeric derivatives of the original user function. Furthermore, these calculations are written entirely in the native MATLAB language, and thus the process may be repeated to obtain nth order derivative files. ... -
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Virtual Laboratory Environment
A multi-modeling and simulation environment to study complex systems
...VLE provides a complete set of C++ libraries, called VFL (VLE Foundation Libraries), to develop DEVS models, to gets results of simulations, to launch simulation on cluster. The models can be developed with the DEVS formalism or with the classical mathematical formalism: Ordinary Differential Equation with Euler, Range-Kutta or QSS integrator, Finite state automaton (FDDEVS, UML State chart, Hybrid Petri net). The VLE environment provides an IDE to develop C++ models, DEVS coupled models. VLE have also three ports to use the VFL with Python, Java and R programming languages. -
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IT++ is a C++ library of mathematical, signal processing and communication classes and functions. Its main use is in simulation of communication systems and for performing research in the area of communications.
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Dynamic Linkage
Dynamic Linkage Social Aggregation Model
This project will create a user-friendly modeling system for studying animal social aggregations. The model codifies the a new hypothesis that the animal's state, kinematics, and the group's emergent properties are dynamically linked together, with each one affecting the others. The model will be constructed using Object-Oriented MatLab. -
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JDistlib
Java library of statistical distribution
A Java package that provides routines for various statistical distributions. Based on R version 2.14.1 (continuously updated; current as of R v3.3.0). The major difference is that JDistlib is thread safe. The library contains the density (pdf), cumulative (cdf), quantile, and random number generator (RNG) routines of the following distributions: Ansari, Beta, Binomial, Cauchy, Chi square, Exponential, Fisher's F, Gamma, Geometric, Hypergeometric, Kendall, Logistic, Log normal, Negative... -
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Scripted Roulette
Simulation tool for the casino game Roulette
Scripted Roulette is an original application which helps you to develop and analyze new betting strategies for the casino game Roulette. Learn and understand more about the chances you really have to win. -
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diauxic growth model ensemble
An ensemble of models showing diauxic growth behavior
An ensemble of mathematical model is presented that all show diauxic growth behaviour of a bacterial culture. Carbon catabolite repression (CCR) is the main mechanism controlling carbohydrate uptake in bacteria, and therefore also controlling whether or not different carbon sources are metabolized in parallel or sequentially. Although described as a paradigm of the regulation of bacterial metabolism, the underlying mechanisms remain controversial. -
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ChEnMTD
Calculate the number of theoretical trays with McCabe-Thiele method
Use the McCabe-Thiele method to calculate the number of theoretical trays in a distillation column operated under the conditions specified. It has tools for data analysis to obtain empirical or semi-empirical equilibrium models. You can even use cubic splines. This project uses icons of "Open Icon Library" https://sourceforge.net/projects/openiconlibrary/ -
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Glycosylation Microviewer
An application create, simulate and adjust N-linked glycosylation.
Glycosylation Microviewer is an application that create N-linked glycosylation raction network. The model used in the application is based on two significant papers: 1.1997 Pablo Umana, James E.Bailey A Mathematical Model of N-linked Glycoform Biosynthesis. 2.2005 Frederick J.Krambeck, Michael J.Betenbaugh A Mathematical Model of N-linked Glycosylation. The application allow to simulate the network in dynamic form with various ODE solvers(Euler, Runge-Kutta etc). Genetic Algorithm is used to adjust the kinetic parameters of Michaelis-Menten equations in glycosylation reaction network. ... -
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The target system of this project is to develop mathematically efficient program code generator from cellml like biological models described by mathematical markup languages.
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OpenCMISS-Zinc
A Library for Interactive Modelling and Visualisation
The OpenCMISS-Zinc Library (opencmiss.org/zinc), or Zinc, is a software library for building interactive graphical modelling and visualisation applications. Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image processing filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models. -
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LMFD
Lattice-based Multi-Fluids Dynamics;LBM for Gas-solid Two-phase Flows
LMFD ( Lattice-based Multi-Fluids Dynamics) is a multiphase flow simulator in framework of lattice Boltzmann method (LBM). It is a program for the modeling and simulation of multiphase flows (mainly gas-solid two-phase flows) at different levels, including macroscopic two-fluid model (TFM), mesoscopic discrete particle simulation (DPS) , and microscopic direct numerical simulation (DNS) . -
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CADET
Chromatography Analysis and Design Toolkit
...The core of the CADET software is a fast and accurate solver for the General Rate Model (GRM) of packed bed liquid chromatography. The CADET solver covers a wide range of GRM variants, combining different transport and binding models with state-of-the-art mathematical algorithms and scientific computing techniques. The CADET framework also comprises a MATLAB interface and standard routines for parameter estimation, process optimization and experimental design. CADET is freely distributed as a contribution to the scientific community. If you find it useful for your own work, we would appreciate acknowledgements of the CADET software and citations of our papers: http://doi.org/10.1016/j.compchemeng.2010.03.008 http://doi.org/10.1016/j.compchemeng.2018.02.025 -
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Math Simulator
A simulation software for numerical techniques.
Math Simulator is a java-based application which simulates various mathematical techniques.It is extremely useful for the Engineering students and for professionals. Most importantly, unlike most others Math Simulator is an Application rather than a java - library. So, user is not required to have any computer background. A Unique feature of Math Simulator is that it allows you to save queries for later reference. -
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itermd
Software tools for applications of simulations by iterations.
For simulations or modeling studies of regulations, Automation or various phenomena, with parameters that may be random, interdependent variables without simple rules, etc.. It can also be used to study mathematical curves remarkable how 'pragmatic'. The claim of these tools is to facilitate the programming of simulations by providing routines to quickly generate: -display windows and input parameters -help to display the variation in the data as graphs -management of iterations Goal for the user: quickly programme his simulation. ... -
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pyFormex is a program for generating, transforming and manipulating large geometrical models of 3D structures by sequences of mathematical operations.
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10.1109/CCNC.2010.5421745
Decoding Superimposed BPSK Modulated Wireless Transmissions
...This paper explores the decoding of superimposed transmission resulted by multiple synchronized simultaneous transmissions. We devise a coding scheme that achieves the identification of individual transmission from the synchronized superimposed transmission. A mathematical proof for the existence of such a coding scheme is given.
