Showing 18 open source projects for "diffusion"

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  • 1
    ViennaSHE is a modern semiconductor device simulator for 1D, 2D and 3D device simulation. It relies on deterministic solutions of the Boltzmann Transport Equation using Spherical Harmonics Expansions.
    Downloads: 0 This Week
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  • 2

    ADE_3D_FEM

    A 3D ADE FEM solver including a manual and a basic preprocessor

    A 3D Advection-Diffusion Equation Finite Element Method solver including a user's manual and a basic pre-proccessor.
    Downloads: 0 This Week
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  • 3
    Cantera
    Cantera is a suite of object-oriented software tools for problems involving chemical kinetics, thermodynamics, and/or transport processes. It can be used from MATLAB, Python, C++, or Fortran.
    Downloads: 1 This Week
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  • 4
    KoBra
    This is a standalone program for a) the calculation of diffusion coefficients of sorbates inside nanoporous materials at different loadings by using transition rate constants and for b) solving the master equation for a system consisted of a large number of unit cells per each direction. It is based on the following published paper "Kolokathis, P. D., Braun, O. M.. J. Comput. Chem. 2019, 40, 2053– 2066.
    Downloads: 0 This Week
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  • 5
    BioFVM

    BioFVM

    3-D diffusion solver for biological problems

    BioFVM is an open source diffusive transport solver for biological problems. It can solve for the diffusion of tens or hundreds of substrates on large 3-D domains. For simplicity, the code has minimal external dependencies. BioFVM was first published in: A. Ghaffarizadeh, S.H. Friedman, and P. Macklin. BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations. Bioinformatics 32(8): 1156-8, 2016.
    Downloads: 1 This Week
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  • 6
    STochastic Engine for Pathway Simulation
    Stochastic simulator for signaling pathways occuring in biological cells. Handles reaction-diffusion processes in 3D tetrahedral meshes. Please check our new repository: https://github.com/CNS-OIST/STEPS
    Downloads: 3 This Week
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  • 7

    3d heat conduction parallelized

    MPI based Parallelized C Program code to solve for 3D heat conduction.

    Type - 3D Grid - Structured Cartesian Case - Heat conduction Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - Yes Inputs: [ Length of domain (LX,LY,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The six boundaries are heated to 100 C, 200 C, 300 C, 400 C, 500 C, 600 C respectively.
    Downloads: 0 This Week
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  • 8

    3d axisymmetric heat diffusion C code

    A C Program code to solve for Heat diffusion in 3D Axi-symmetric grid.

    Type - 3D Grid - Axisymmetric Case - Heat diffusion Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LR,LZ,LH) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup - Periphery heated to 500 C Top to 500 C Bottom to 500 C
    Downloads: 0 This Week
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  • 9

    2d axisymmetric heat diffusion C code

    A C Program code to solve for Heat diffusion in 2D Axi-symmetric grid.

    Type - 2D Grid - Axisymmetric Case - Heat diffusion Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LR,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup - Periphery heated to 200 C Top to 300 C Bottom to 100 C
    Downloads: 0 This Week
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  • 10
    An urban air pollution model based on the mass-conservation principle and the advection-diffusion equation. A technical report R-207-2012 can be found in http://www.nies.go.jp/kanko/kenkyu/index-e.html
    Downloads: 2 This Week
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  • 11
    Diffusion of Innovations Simulation
    Downloads: 0 This Week
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  • 12

    Ideal Gas Simulator

    An ideal gas simulator 2D developed in Java

    Downloads: 0 This Week
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  • 13
    A high-performance simulation package for sampling the chemical and reaction-diffusion master equations. Primarily intended for running stochastic simulations of microbial cells.
    Downloads: 0 This Week
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  • 14
    fick is fluid diffusion simulator (for both liquids and gases): it uses the Flick diffusion laws to drive the evolution of a cellular automata.
    Downloads: 0 This Week
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  • 15
    Meredys (MEsoscopic REaction DYnamics Simulator) is a particle based stochastic simulation software designed to model and simulate reaction-diffusion systems. (http://www.ebi.ac.uk/compneur-srv/meredys.html)
    Downloads: 0 This Week
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  • 16
    4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
    Downloads: 0 This Week
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  • 17
    This program simulates the performance of the supersonic continuous wave chemical laser by solving 2D-system of Navier-Stokes equations in slender-jet approximation that includes multi-component diffusion, non-equilibrium chemical reactions and radiation
    Downloads: 0 This Week
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  • 18
    FSEM is a set of freeFEM++ scripts and C++ code to solve the drift-diffusion (DD) semiconductor device equations by the finite element method (FEM). It was initially developed for the nonlinear study of semiconductors under high optical injection.
    Downloads: 0 This Week
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