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The Global Epidemic Simulator is a platform for modelling directly transmissible human diseases such as influenza, and testing intervention policies that may reduce the duration or severity of an outbreak of such a disease. Building on previous work, this model is spatial and individual-based, using various geographical and demographic data sources to place households at absolute locations, populated with individuals of specific ages who each attend schools or workplaces situated in their...

A language and a compiler for the solution of differential equations (ODE). Both lumped and distributed variables (PDE) will be possible. The ability to solve DAEs is a long term goal. The compiler generates a Python program that does the computation.

The goal of this project is to provide a platform for simulating biological aging and evolution of the population. The simulation is done using Penna bit-string model. Its based on the mutation accumulation theory.

rmachine is a register machine simulator (the complexity theory version), programmed in python, complete with a module to be used in your programs and a (PyQt4) GUI.

Famms is a Python module for applying the method of manufactured solutions (MMS) to PDE simulators written in C/C++, Fortran, and Python.

MBSim has been moved to GoogleCode: http://code.google.com/p/mbsim-env/

SMMP (Simple Molecular Mechanics for Proteins) is a program library for protein simulations with an emphasis on advanced Monte Carlo algorithms. It includes various force fields to calculate the energy of a protein and protein-protein interactions.

3D -Darstellung von Gebäuden mit Hilfe von OpenGL

This project has moved to http://sourceforge.net/projects/ngspice-ext.

A sleep research experiment manager, EDF (EEG, EMG etc) with power spectrum analysis and visualisation, and Process S ('sleep pressure') estimation following Achermann et al (1993).

Tina's Random Number Generator Library (TRNG) is a state of the art C++ pseudo-random number generator library for sequential and parallel Monte Carlo simulations.

TuringIDE is an integrated development environment (IDE) for simulating Turing Machines with multiple tapes and states. It offers debugging tools, XML import/export, and other advanced features for scientific experiments on formal symbol allocations.

NetLogo is a software platform for agent-based modelling. Here we present an R extension of NetLogo. It adds new NetLogo primitives … New locations: R-Extension: http://r-ext.sourceforge.net Rserve-Extension: http://rserve-ext.sourceforge.net

This project has been moved to GoogleCode: http://code.google.com/p/hdf5serie/

DIFFR is a menu-driven graphical software whereby the problem of a plane wave diffraction on a rough surface can be solved using several numerical and approximate methods.

Arena is a computer simulation in which programs compete for CPU time and access to main memory. Processes such as the dynamics of punctuated equilibrium, host-parasite co-evolution and density dependent natural selection are amenable to investigation.

representation by relations vs data storage. pile unifies the contradicted qualities of tables/trees (databases) and complex networks, order and flexibility. dynamical data generation on call. fast. natively compressing similarities. search across scopes.

VPP - Velocity Prediction Program - a Matlab library for sailing boat performance simulation. Based on DSYHS or user provided data. ###### A python version is currently under development and available upon request, please contact me at gianmail+gvpp@gmail.com ###### The new beta version replaces the previous alpha version after some bugs fixing and enhancements in the postprocessing output.

CUDA-SPHERE-FWD-MEEG is a CUDA C based toolkit which provides a GPU based implementation of the spherical model forward solution for the 306 channel Elekta Neuromag MEG system and the EEG. The 1-Sphere forward solution for the MEG and the 4-Sphere forward solution for the EEG is implemented in CUDA C and an accelerated solution is obtained using the NVIDIA GPU when the solution is calculated for a large number of dipoles (on the order of 15000 and above) and sensor locations. Speedup by a...

This program was written to dimonstrate errors in transmission for a presentation on Claude Shannon's Noisy Channel Coding Theorem. It takes an input file, the probability of a bit being flipped, and, if specified, the size of the header of the file. The program was intended to take monochrome bitmap files as input, so that each bit refers to a pixel in the image and thus, it would be easy to see errors in the output file, as some of the pixels would be flipped; however, it will work on any...

Celeste is a tiny and simple Cellular Automata simulator written in Java. It is a command line application that writes an image of each simulation step. Celeste was designed to run Conway's Game of Life but other rulesets can be implemented as well. It is released under the extremely permissive WTFPL.

Java Micro Benchmark - control tasks required to determine the comparative performance characteristics of the computer system on different platforms. Can be used to determine the effect of different software on the performance of a computer system.

iES is a interactive emergency simulator that displays maps and resources to emulate and study a mass-casualty event.

***** Discontinued (may still work but will not be updated and supported anymore) ***** This extension connects the simulation platform NetLogo with the statistical analysis software R via Rserve. It adds some new primitives to NetLogo, which offers the interchange of data with R and the call of R functions from NetLogo. See the documentation for more details. There is a similar extension, which use a direct connection to R via rJava/JRI, see http://r-ext.sourceforge.net. This...