Search Results for "gnu/linux" - Page 36
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Showing 2307 open source projects for "gnu/linux"
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Evrika
Science simulator and advanced calculator based on modules
Evrika is a science simulator and advanced calculator, which is based on modules. Modules are libraries containing definitions of concepts that can be used in the simulation. By definitions we mean properties, actions, reactions, etc. Evrika is used for creating both simulations and modules, so you can build your own module of elements, then use them to create virtual experiments and simulations. Also, you can make advanced calculations. Evrika is basically an executable that reads and... -
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Topographica
Simulation software for brain modelling
Topographica is a neural modeling package developed in a Human Brain Project grant from NIH. Topographica helps neuroscientists and computational scientists simulate and understand how topographic maps contribute to brain function. Topographica is now primarily maintained at github.com; see https://github.com/ioam/topographica for recent updates and releases. -
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Assembly of mixed genomes
Scripts used to assemble and deconvolute mixed mitochondrial genomes.
Perl scripts used in the paper "Index-free de novo assembly and deconvolution of mixed mitochondrial genomes" by McComish BJ, Hills SFK, Biggs P and Penny D (2010) Genome Biology and Evolution 2:410-424. -
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itermd
Software tools for applications of simulations by iterations.
For simulations or modeling studies of regulations, Automation or various phenomena, with parameters that may be random, interdependent variables without simple rules, etc.. It can also be used to study mathematical curves remarkable how 'pragmatic'. The claim of these tools is to facilitate the programming of simulations by providing routines to quickly generate: -display windows and input parameters -help to display the variation in the data as graphs -management of iterations Goal... -
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Java Evolutionary Computation Library
As of 2012-12-18, this project may now be found at Google Code.
As of 2012-12-18, this project may now be found at http://http://code.google.com/p/paba JECO is a Evolutionary Computation Library deveoloped in Java. It includes a variety of evolutionary optimization techniques such as genetic algorithm, genetic programming, evolutionary mapping methods, particle swarm optimization, ant colonies, etc. -
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MCloudSim/NovaCloudSim
a distributed cloud simulator written in Java
MCloudSim(formerly called NovaCloudSim) is a simulator written in Java for geographically distributed clouds. The software is modified from CloudSim 3.0, which is an open source data center simulator. All functions of CloudSim are reserved, and our newly added files are in the package org.cloudbus.cloudsim.nova. MCloudSim has following characteristics: (1) The overlay protocol can be freely replaced, and we have already ported Pastry, Kadmelia, Chord from PeerSim; (2) A Petri-Net... -
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Calculates Shockley-Read-Hall recombination in semiconductors with 2 defect levels in dependence on photo generation rate. The program runs within MATLAB programming environment version 6.5.0 release 13 or newer offering a Graphical User Interface (GUI).
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vTclFF_DensForce
Form-Finding of Cable Net Structures using the Force Density Method
vTcl FF DensForce is a software developed for form-finding of linear network elements working under axial force using the "force density" method. __________________________________________ vTcl FF DensForce es un software de busqueda de forma para mallado de elementos lineales trabajando a fueza axil utilizando el metodo de "densidad de fuerza". -
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SunlightLB is an open-source 3d lattice Boltzmann code which can be used to solve a variety of hydrodynamics problems, including passive scalar transport problems.
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SunlightCBM is a suite of perl scripts for constraint-based modelling and flux-balance analysis in metabolic networks.
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JGridMap
Java project for fast and easy visualisation of objects in a grid.
- Scroll/Zoom - Object dragging - ... -
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Carnaval est un logiciel destiné au calcul de masques et d'ensoleillement. La version actuelle permet de calculer les trajectoires solaires et les masques de terrain liés au relief (modèle issu des données SRTM). Les développements ont été repris par Sober Software. Merci de visiter ce site pour télécharger la dernière version et accéder aux nouvelles fonctionalités : www.sober-software.com
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Hackerando la Macchina Ridotta
Hackerando la Macchina Ridotta (Hacking the Smaller Machine)
HMR is a computing history project of the University of Pisa. The HMR goal is to virtually rebuild old computers so it is possible for everyone to use them and actually feel how hardware and software technologies evolved in the course of time. The Macchina Ridotta (that in Italian means Smaller Machine) was the very first computer built in Italy by the University of Pisa in 1957. The MR is also the first machine rebuilded by the HMR project. More in general, HMR aims to support... -
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Libpsht is a collection of algorithms for efficient conversion between maps on the sphere and their spherical harmonic coefficients. It supports a wide range of pixelisations (including HEALPix, GLESP, and ECP). Development for this libary has stopped; its successor is libsharp (http://sourceforge.net/projects/libsharp).
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Liowsn Project
Remastered operating system for WSN
Liowsn (Linux for works with WSN) was created to assist teachers, students and people involved with projects of Wireless Sensor Network (WSN). The operating system is Ubuntu 9.10 remastered and it contains several tools for simulation and testing installed to work with WSN. Discussion Group: http://groups.google.com/group/liowsn-users User manual: https://dl.dropbox.com/u/4912938/LiowsnManual_EN.pdf (English Version) https://dl.dropbox.com/u/4912938/LiowsnManual_PT.pdf (Portuguese Version) -
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InfoTokens
Simulates an open-content discourse community (e.g. a wiki).
InfoTokens simulates the accumulation of information by a virtual discourse community. Information is represented as tokens whose states can be either true or false. Individuals in the virtual community can add, delete, and change tokens. The accumulation of true and false information -- due to the population's accuracy, rate of vandalism, correction of vandalism, and population growth -- can then be studied for trends. -
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DReAMSim
Dynamic Re-configurable Autonomous Many-task Simulator
DReAMSim provides a simple simulation framework for modeling homogeneous and/or heterogeneous (re)-configurable processing elements in a large-scale distributed environment. In particular, DReAMSim enables users to model task scheduling techniques at a preliminary design stage in order to investigate their performance potential. The simulation framework makes it easy to extract various performance and resource utilization related statistics to study the behavior of different task... -
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birgHPCC
Rapid CUDA Cluster Deployment
...While retaining the major functions of the original birgHPC, including automated computing cluster conversion and auto slots detection, the new version (birgHPCC) is capable of creating and configuring a compute unified device architecture (CUDA) computing cluster, hence the extra “C” in the name. In addition to the increase in image size (less than 2 gigabytes) and a new Linux base (previously Debian, now Ubuntu), CUDA-capable bioinformatics software programs, such as NAMD, HOOMD-blue, VMD, GPU-HMMER and GPU-BLAST, are pre-installed in birgHPCC, along with the CUDA driver, libraries and software development kit (SDK). In short, birgHPCC is the world's first CUDA-ready, bioinformatics-based, live DVD. -
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ACADO Toolkit
Toolkit for Automatic Control and Dynamic Optimization
ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface. The object-oriented design allows for convenient coupling of existing optimization... -
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Omnet++ EPON Module
1G-EPON modules for OMNet++
This is a basic implementation of (1G) Ethernet Passive Optical Network (EPON) for OMNet++ 4.1. OLT and ONU modules are provided. MPCP protocol has been implemented to assign LLIDs dynamically based on a global service configuration module. Service differentiation is based on 802.1Q VLANs (included). Basic implementation for both polling and non-polling DBAs is included (fixed allocation per ONU in both cases). An example .ned for each case can be found under "PON/simulations" folder. -
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Software agents and human actors combine their decision making skills to arrive at efficient solutions to real-life planning and scheduling problems, especially in domains where unexpected incidents require changes to existing plans.
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SPSens
Stochastic parameter sensitivity analysis for chemical networks
SPSens is a complete software package written in C that estimates parameter sensitivities for stochastic models of chemical and biochemical reaction networks using Monte Carlo (MC) stochastic simulations. It is possible to estimate sensitivities with respect to system parameters using the following algorithms: finite difference methods (crude monte carlo, common reaction path, coupled finite differences); likelihood ratio methods; and regularized pathwise derivatives. Additionally the... -
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caseGen
... [BATCH], [ANALYZE] and [OPTIMIZE] cases in OpenFOAM and others
'caseGen' allows you to simplify your numerical simulation problem! Actual its not fairly tested so please contact me if you see any refinements or found bugs.
