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Braincirc is an open source modelling environment for building and sharing models. It is designed for UNIX-like systems, and is particularly appropriate for biological/chemical models. Below is the latest release with some SBML support.
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A reactor solver which uses stochastic particle methods to model particle population balances. This code is developed by the CoMo group in the chemical engineering department at the university of Cambridge (como.cheng.cam.ac.uk).
The BioSimz project aims to deliver a library (as well as the interface) to conduct large-scale biomolecular simulations at their atomic scales of detail. The initiative idea is to observe the protein crowding in vivo; it now can do much more than that!
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NetEmul is a program for simulating computer networks. It makes possible to build, configure networks and verify its availability. This program allows beginners to see a principles of operation CN and gives a scope for experiments.
The SBML ODE Solver is a command-line tool and programming library (ISO/ANSI C) for construction and numerical integration of an ODE system, derived from an SBML based description of a biochemical reaction network.
Development has moved to https://github.com/raim/SBML_odeSolver . Please download the latest version from there!
This is a C library with a set of functions that allow the user to evolve biological networks. The user provides a fitness function in C, and the library will do the rest. A few simulation algorithms and examples are included.
Shawn is a discrete event simulator for large wireless sensor networks. It does not compete with others well-known simulators by simulating individual ISO layers and the protocols within these layers. Shawn emerged from a more algorithmic approach.
THE PROJECT HAS BEEN MIGRATED TO GITHUB: https://github.com/itm/shawn
The CoroBot is a PC-class robot by CoroWare, Inc. This project contains the Microsoft Robotics Developer Studio drivers for this hardware, as well as a simulated robot for the Microsoft Robotics Developer Studio simulator.
This is a development code for computer science research. It implements a solver for compressible gas dynamics. The code is distributed-memory parallel using MPI and data-parallel using the OpenCL framework.
A general purpose Robotics simulator framework and implementation.
Built as a project for the Center for Intelligent Systems in the Computer Science department in the Technion.
aLice - ALice is likely the most Inefficient Code Ever written for boundary elements It is a c++ multi-platform code (tested on MAC-OS X 10.5, Win32, Ubuntu linux 9.04) for BEM analysis of steady and time dependent problems (in progress)