PySCeS Constraint Based Modelling
RSSceSim - Reputation System Scenario Simulator
Parallel coupled multiphysics simulation application
Epidemic simulator
Parallel simulators for Membrane Computing on the GPU
The FMI++ PowerFactory FMU Export Utility
a Toolset for Molecular Mechanical Force Field Parameterization
Prediction of proteinfolding in 2D HP model
Multiagent simulator of road traffic in Qt/C++ and OpenStreetMap.
Allows you to build your own circuits and test them
NeuralSyns is a neural simulator for large spiking networks.
Numerical models for chemical and process engineering
Penthode simulates, draw and plot electrical power distributions
Flexible and eXpandable Cpu simulation