Search Results for "b-processor"
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Showing 3 open source projects for "b-processor"
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Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
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bnf2xml
simple BNF parser makes xml markup of matches
... needle in haystack and what to show, ie: <alph> ::= a | b | c | d ... <word> ::= <alph>+ bnf2xml is a top down recursive parser. Unlike buttom up parsers like gcc(1) or some top downs, bnf2xml is completely unambiguous / resolves ALL conflicts. Slower on ave. for parsing C or than sed(1) for simple searches. Far easier than using flex/C to create a parser. caveate: I do not suggest it's worth while to make a new gcc(1) using bnf2xml. bnf2xml an nth BETA release, but no complains yet. -
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iMeMex is a dataspace management system. iMeMex is a research prototype. The package also provides several useful components for research such as external sorting, B+-trees, inverted indexes, content converters, query operators, and graph indexes.
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