Search Results for "text processing"

Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.

Command-line toolset for extracting text from files (documents, images, archives) into SQLite with OCR support. Simple, expandable, one shell script only.

bnf2xml a simple BNF parser that takes text as input, searches according to a BNF query file, and outputs text marked up by the xml labels that show context. bnf2xml is as simple to use as any text binary ie, awk(1) grep(1). bnf2xml does not require C API because it outputs simple xml labeling. README is visible on file dl page. EXAMPLE: $ echo "hi" | bnf2xml patternfile <word><alph>h</alph><alph>i</alph></word> or <gas>hydrogen iodide</gas> patternfile says how to find...

Tiny Notes is a note/code organizer. It is meant as a small and simple tool that helps you organize small snippets of text, through which you can quickly search. Supports syntax highlighting.

A java wrapper for microsoft's ifilter technology.

SDSearcher is used to search for files and file contents in Linux