Search Results for "batch extract"

* Please check latest update on https://github.com/igps-ftk/iGPS A tool written in Interactive Data Language (IDL), for processing and analyzing daily continuous GPS position time series. It can read time series in various formats, detect outliers, remove abnormal observation spans, find jumps, extract common-mode components(CMC), etc.

A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too).

SeqHunter2 is a stand-alone software with graphical user interface, running on Microsoft windows system. It is programmed with the following functions: 1) collect and manage local sequence databases; 2) run blast search by using a batch of sequences and with abundant output formats; 3) extract sequences by a set of IDs or coordinates; 4) generate sequences alignment; 5) edit sequence and translate nucleotide to proteins; 6) browse genome and search genes; 7) collect resource items and link to the website. The full version collects all available oomycete plant pathogens genome sequences and information of research related resource, while the lite version is flexible for non-oomycete users to collected the data they are interested.

Xinu2 is a complete rewrite of xinu (http://www.viciao2k3.net/services/xinu/) to batch recovering and calculation of web indicators like Google Pagerank or Alexa. It can also extract some informations of web page based on manual/generic rules.