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BioSunMS, a flexible software platform for submission, management, retrieval of sample and MS data(MALDI or SELDI), and clinical proteomics-related statistical analysis. BioSunMS integrated all functions into a user-friendly desktop RCP application.
MathMLWYSIWYGEditor allows users to generate mathematical, physical and engineering formulas using the mathematical markup language, MathML. Requires hardly any knowledge on MathML.
DiscriAlign implements a novel algorithm that aligns a set of biological interaction networks.It identifies both functionally conserved and dissimilar regions.
Provides a GUI interface to grammatical structure and relations (as parsed by the Stanford Parser) of any text.
Contains grammatical relation editor to modify, import, export grammatical relation definitions (tregex patterns and features).
Draw 2D: function chart, data points chart, statistical bar chart. It's possible to combine all 3 types of chart into one. This is powerfull and easy tool, as it gives ability to manage many charts parameters. This may often compete with Gnuplot and oth
NOTE: please refer to OPPL 2. OPPL is a preprocessor language that allows users to define macros for altering OWL ontologies. The syntax is very simple and intuitive, offering a very abstract and high level "scripting" language, for example for int
NumberMonkey is a calculator written in Java, including basic operations and additional functions; new functions are added with each release. It can be implemented as a standalone desktop application or as an applet within a webpage.
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
Genome Data Visualization Toolkit (GDVTK) is a Java library for building bioinformatics visualization application. See Bioinformatics, 2004 Mar 22;20(5):727-34. Java-based application framework for visualization of gene regulatory region annotations.
Earth3D is a program to display the earth as a 3D globe (including heightfields) in real-time. One can zoom until cities become visible. It uses huge datasets that are loaded on demand over the internet. It is possible to embed dynamic data into the view
A platform which hosts battles between Fruit War robots - special java programs. The platform accepts source code as robot, and ranks all robots according to battle result. This project has been totally refined and is now hosted at http://robotypo.appspot.com
This project provides bookmarklet-based web page overlays based on recognized terms from vocabulary servers. These overlays can be used to assist users with unfamiliar terminology or can be used for annotation of web-based data and literature.
This project is Java API to access Unicont Cardio Pager (http://unicont.ru/index2.html) device. This API allows access pager or get ECG data via serial port and through a modem line (using proprietary Windows ActiveX).
CVSharp (aka Computer Vision in C#) is a Computer Vision project. Until the present day just one part of the whole project was actually developed. It's called CVSharp Lab, an Image Processing Tool.
The Research Mapping Tool (RMT) is a citation utility for academics that provides deep searching of online sources for citations/related articles and graphical representation of the links between articles.
PROSE is a system that performs controlled, systematic, and efficient modification of the code of running Java applications without requiring them to be shut down. PROSE is an infrastructure that supports software adaptation by extending apps at runtime.