Search Results for "gnu linux" - Page 85
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Showing 7565 open source projects for "gnu linux"
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AutoMap
AutoMap is a tool for structural biology and drug design.
AutoMap takes a series of poses obtained from molecular docking and applies the site, epitope and conformational mapping techniques to the poses to select likely ligand binding modes. -
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E.N.M.L. means Environmental Noise Model Language. The target of the project is the definition of a XML specification model mainly devoted to electronic acoustic data exchange. ENML aims to format ANY kind of noise measurement.
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Exows extends the capabilities of the OWS (OGC Web Services). It enables the multilingualism functionalities for OWS (INSPIRE compliant) and allows complex features schemas for WFS and WMS getFeatureInfo (GML). It was developed by BRGM in OneGeology and was continued by BRGM in EUROGEOSS.
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PyDQP
Distributed QP Solver in Python
PyDQP implementes 11 different dual decomposition schemes, both first and second order, in order to solve quadratic programs in a distributed fashion. -
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The JSky package contains java classes for displaying astronomical images, searching astronomical catalogs and plotting catalog symbols on images. The jskycat application is also included and makes use of most of the features.
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A bioinformatics tool to PRe-process and show INformation of SEQuence data. The tool is written in Perl and can be helpful if you want to filter, reformat, or trim your sequence data. It also generates basic statistics for your sequences.
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AJT is a set of utility classes for Java for handling some bioinformatics data, graphics file export, GUI widgets, and classes that should long have been added to the official Java API.
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BitBang
Agent-based framework for Artificial Life and Complex Systems
BitBang is an agent-based simulation framework, best suited for complex systems or artificial life research. It is developed with ease of integration in mind, allowing the interplay with existing 3D and physics engines. -
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Framework for individual and population genome assembly and discovery of genetic variants from sequence reads.
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SLFFEA stands for San Le's Free Finite Element Analysis. It is a package of scientific software and graphical user interfaces for use in finite element analysis. It is written in ANSI C by San Le and distributed under the terms of the GNU license.
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RTSim is a simulator for real-time systems written in C++. It has been developed as an internal project at Scuola Superiore Sant'Anna as part of many research project, mainly thanks to the work of many PhD students.
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RaTrav
mean first passage times and node occupancies calculations
RaTrav tool was designed to support computational biology studies where mean first-passage times (MFPTs) between initial and single or multiple final states in network-like systems are used. The tool approves arbitrary networks (graphs) where a dynamics of the Markovian type takes place. Two methods are made available for which their efficiency is strongly dependent on the topology of the defined network: the combinatorial Hill technique and the Monte Carlo simulation... -
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Customizable software to smoothly fit non-linear, high-dimensional data. SDK in C with C++ wrappers, plus demo applications (all under LGPL). Versions under Windows and Linux already operational. Further progress depends on your imagination!
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CI-Reports is helpful to generate a report of clinical trial data based CDISC SDTM. CI-Reports also provide the reports as PDF, Excel, Word, Flash, LibreOffice and RTF.
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Gebabbel
A frontend for gpsbabel
Gebabbel is a GUI for the famous gpsbabel, a command line tool to convert various GPS file formats back and forth. Thanks to gpsbabel, you cannot only convert files but also exchange data with your GPS device (e.g. Garmin and Magellan) directly. -
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This software gives you at the moment what means any of that blood or urine analyses you do by telling what diseases are associated to high or low values. It's only for educational purposes!
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The Java Context Directory (JCD) is an information system to store and use contextual information. It enables a software developer to create context-aware applications and provides a client for mobile devices.
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Statistics modules in Perl Data Language, with a quick-start guide for non-PDL people. They make the PDL shell work like R, but with PDL threading (fast automatic iteration) of procedures including t-test, linear regression, and k-means clustering.
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EASER
Ensembl Easy Sequence Retriever
Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335. -
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Soundcard Digital Voltmeter
Measures analog DC signals with the PC soundcard.
With this software and a simple external hardware, the sound card input of a PC can be used to measure stationary or slowly changing analog signals (e.g. voltages). The hardware converts the input signal into a voltage proportional frequency. The software measures the frequency via the sound card and calculates the corresponding input signal level which is displayed numerically and in a “scope-like” view. -
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KochCurve
This small library implements a data structure for Koch curves.
This small library implements the Koch curve, snowflake and anti-snowflake like a Shape to be used like any other Java shape. You can test the library by compiling the test applet in Files.
