Showing 398 open source projects for "basic linux"

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  • 1
    Shoal

    Shoal

    A lot of fish in a shoal, in a gigantic scientific ocean.

    Ours organization website GCModeller.org is coming online soon! Shoal Shell is the sub project for the "genome-in-code"(http://code.google.com/p/genome-in-code/) virtual cell modelling project of the bacteria Xcc 8004. Shoal Shell aim at provide the modelling tool and the debugging tool for the GCModeller virtual cell modelling, And from the extendible library package, shoal shell can manage to accomplish the entire modelling job for any other bacteria species. Shoal Shell Project...
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  • 2

    ICN Simulator

    An ICN Simulator based on the Blackadder paltform.

    This is a basic implementation of an Information-Centric Network simulator, following the architecture suggested by Blackadder. It was by the University of Essex for the needs of the PAL project and it include Publishers, Subscribers, RV and a Topology Manager.
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  • 3
    Identikit
    A basic and easy java program to make black and white identikit drawing ,with a library of face elements that you can also modify and expand without limit !Source code available. Also available a very rough base for a 3D construction of the face.
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  • 4
    Spherical Harmonics Manipulator

    Spherical Harmonics Manipulator

    Software to make fast synthesis of spherical harmonics global models

    This software computes synthesis of spherical harmonics models on sparse coordinates or grids (provided in a geodetic or geocentric reference system). It exploits basic parallelism using openmp directives. A solution with MPI has not be taken into account since it cannot be so easily manageble by final users.
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  • 5
    GPS Interactive Time Series Analysis

    GPS Interactive Time Series Analysis

    A software for processing and analyzing time series in Earth Science

    Along with calculating basic statistics and quality parameters such as mean and variance, the soft-ware is capable of importing and visualizing different standard time series formats, determining and removing jumps and outliers, and makes numerical and publication quality graphical outputs. Bivariate statistical analysis (including correlation coefficient and linear regression) and time series analysis (including auto and cross-spectral analysis, wavelet power spectrum, spectrogram and...
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  • 6

    JSim

    Java-based discrete event simulator of an M/M/s queue system

    JSim is a Java-based discrete event simulator of an M/M/s queue system. The target audience are students and educators who may use it to explain and understand the basic principles of the system. JSim includes a library of classes that can be used to modify the application to simulate other types of queuing systems as well. Therefore, it may be used as starting point to build larger, application specific simulator.
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  • 7
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
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  • 8

    alvinLAS

    Excel Add in to import LAS (Log ASCII Standard) to Excel Sheet

    Currently only LAS 2.0 unwrapped is supported.
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  • 9
    mathSuite

    mathSuite

    Powerful Calculus Environment and Matrices Handling Engine

    mathSuite is a very powerful Mathematical Suite which deals principally with complex algebric and geometric operations. It is powered by the fabulous ExprEval C Parser. The main purpose of this project is fast math-oriented algorithm virtualization, with an optimized direct text interface. Also it gives you a very powerful and fast Calculus Environment which let you handle easily interchangeable variable lists, matrices, LOGS and Settings Layouts with optimized Items Lists Managing Engine....
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  • 10

    Brandy Basic V Interpreter

    Brandy is an interpreter for BBC Basic

    Brandy is an interpreter for BBC Basic (or Basic V) that runs under a variety of operating systems. Basic V is the version of Basic supplied with desktop computers running RISC OS. These were originally made by Acorn Computers.
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  • 11
    OpenNLP provides the organizational structure for coordinating several different projects which approach some aspect of Natural Language Processing. OpenNLP also defines a set of Java interfaces and implements some basic infrastructure for NLP compon
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  • 12

    Larch: Data Analysis for X-ray Spectra

    Data Processing and Analysis for X-ray Spectroscopy and More

    Larch is a scientific data processing language that is designed to be easy to use for novices and complete enough for advanced data processing and analysis. Larch provides a wide range of functionality for dealing with arrays of scientific data, and basic tools to make it easy to use and organize complex data. Larch has been primarily developed for dealing with x-ray spectroscopic and scattering data, especially the kind of data collected at modern synchrotrons and x-ray sources. ...
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  • 13

    TIDES

    Taylor series Integrator for Differential Equations

    Taylor series Integrator for Differential EquationS. This software is developed by Profs. A. Abad, R. Barrio, F. Blesa and M. Rodriguez, (GME, University of Zaragoza, Spain). It consists on a C (Fortran) library, libTIDES, and a Mathematica package, MathTIDES. (MathTIDES requires Mathematica version >= 7.0) . Basic references: * A. Abad, R. Barrio, F. Blesa, M. Rodriguez, 2012. Algorithm 924: TIDES, a Taylor series Integrator for Differential EquationS, ACM TOMS. 39, no. 1, art. 5....
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  • 14

    BiomeNet

    BAYESIAN INFERENCE OF METABOLIC DIVERGENCE AMONG MICROBIAL COMMUNITIES

    Metagenomics yields enormous numbers of microbial sequences that can be assigned a metabolic function. Using such data to infer community-level metabolic divergence is hindered by the lack of a suitable statistical framework. Here, we describe a novel hierarchical Bayesian model, called BiomeNet (Bayesian inference of metabolic networks), for inferring differential prevalence of metabolic networks among microbial communities. To infer the structure of community-level metabolic...
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  • 15
    matGeom

    matGeom

    Library for 2D/3D geometry in Matlab.

    Geometry library for Matlab in 2D and 3D. Contains function for creation and manipulation of basic shapes, computing intersections, transformation, display... The project is being moved to GitHub: http://github.com/dlegland/matGeom
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  • 16

    matImage

    An image processing and analysis library for Matlab

    MatImage is a Matlab library for image processing and analysis in 2D and 3D. It contains more than 250 fonctions for image enhancement, filtering, analysis, or visualisation, as well as for creating basic test shapes. It is built as a complement of the Mathworks image processing toolbox (IPT). Project is being transfered to GitHub: http://github.com/dlegland/matImage
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  • 17
    MRA

    MRA

    A general recommender system with basic models and MRA

    Multi-categorization Recommendation Adjusting (MRA) is to optimize the results of recommendation based on traditional(basic) recommendation models, through introducing objective category information and taking use of the feature that users always get the habits of preferring certain categories. Besides this, there are two advantages of this improved model: 1) it can be easily applied to any kind of existing recommendation models. And 2) a controller is set in this improved model to provide...
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  • 18
    CVM C++ Class Library encapsulates concepts of vector and square, band, symmetric and hermitian matrices in Euclidean space of real and complex numbers. It utilizes BLAS and LAPACK Fortran libraries. See http://cvmlib.com for binaries and more details.
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  • 19

    Truncated power series algebra

    Truncated power series algebra

    This project consists of two object-oriented implementations of truncated power series (TPSA) for arbitrary order and number of variables. Addition, subtraction, multiplcation, division, and exponentiation are all implemented in the algebra as overloaded operators. They can also compute with maps, a map being an array of TPSA objects representing a mapping of a space into itself. They are implemented as arrays of TPSA objects equal in number to the number of variables of the algebra. One...
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  • 20

    RFXCAM

    A CAD/CAM Package for CNC GCode Creation

    RFXCAM is an opensource CAD / CAM package targeted at CNC machines (Mills, routers...). The idea is to create the basic interface for geometry manipulation and toolpath creation. Heavy python plugin support will allow a future community to create a vast selection of unique plugins for added functionality specific to their needs. Tutorial 1: https://www.youtube.com/watch?v=bNvE2H8b6Yc&feature=youtu.be
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  • 21

    EducationalLCS

    eLCS - Educational Learning Classifier System

    Educational Learning Classifier System (eLCS) is a set of learning classifier system (LCS) educational demos designed to introduce students or researchers to the basics of a modern Michigan-style LCS algorithm. This eLCS package includes 5 different implementations of a basic LCS algorithm, as part of a 6 stage set of demos that will be paired with the first introductory LCS textbook. Each eLCS implementations (from demo 2 up to demo 6) progressively add major components of the entire...
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  • 22

    Average

    Command-line calculator of basic statistics.

    Average is a simple and fast command-line Perl utility for calculating basic statistics on a list of numbers (one number per line). It works as a traditional Unix filter and can be used as part of those greatly useful chains of piped commands. It calculates average (arithmetic mean), standard deviation, median, total sum, minimum and maximum values present, and shows the number of processed numbers. Entry can by a text file (any column can be specified, default is the first) or...
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  • 23
    Conceptpower

    Conceptpower

    Conceptpower is an authority file service.

    Conceptpower is an authority file service, which is based on WordNet 3.0 (http://wordnet.princeton.edu) and can be extended as needed. Each entry in Conceptpower is identified by an URI, which should be used to refer to a particular entry. Conceptpower has three parts: a public search function, a management component, and a basic REST interface. The public search function provides the user with basic search functionality. The management component provides a simple user management, and term...
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  • 24
    Software for automated acquisition and analysis of paleomagnetic and rock magnetic data using the RAPID System.
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  • 25

    TriageTools

    Tools for partitioning and prioritizing fastq data

    TriageTools is a collection of tools for partitioning raw data (fastq reads) from high-throughput sequencing projects. The tools are designed for basic data management as well for prioritizing analysis of certain subsets. The project wiki contains usage information.
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