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Digital Signal Processing Block Diagram Compiler - user extendable to all DSP's, but presently supports only the TI C2000 family. Rich support for fixed point arithmetic, both saturated and unsaturated. Block diagram entry is via TinyCAD (included).
An R package for detailed inspection and analysis of LCMS data. An R package developed by Sukhdeep Singh at Department of Surgery and Cancer, Imperial College London,UK.
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Using the Mean Machine, even very large EEG data sets can be analyzed (artifact detection, evoked potentials, frequency analysis, ect.). It is a Matlab GUI application, which can also be run via the commandline without GUI-support.
Given low-density genotypes for pedigrees, and dense genotypes for some people in those pedigrees, computes high-density genotypes for some other people in those pedigrees. This reduces genotyping effort.
A branch-and-prune method to find all solutions to systems of nonlinear equations. The number of variables must equal the number of equations. The variables must have proper lower and upper bounds. The solver has an interface to the AMPL environment.
Computes the characters of some Demazure modules of sl2^. Namely, consider the Weyl group element w_N = ... s_0 s_1 s_0 with a total of N factors. Then we can compute the character of the Demazure module V_{w_N}(m Lambda_0).
GpsPhoto.pl geotags digital photos by using GPS track data recorded at the same time. Matches are based on closest timestamps. An optionally generated Google Earth KML or KMZ file contains the GPS tracks and the geotagged photos.
The SBML ODE Solver is a command-line tool and programming library (ISO/ANSI C) for construction and numerical integration of an ODE system, derived from an SBML based description of a biochemical reaction network.
Development has moved to https://github.com/raim/SBML_odeSolver . Please download the latest version from there!
netcdf-tools is a set of tools for creating netCDF files. It supports commandline use on both Windows and Unix as well as use directly as a Java library. Written by CSIRO Australia and funded by the ANDS Australian Research Data Commons Project
Shawn is a discrete event simulator for large wireless sensor networks. It does not compete with others well-known simulators by simulating individual ISO layers and the protocols within these layers. Shawn emerged from a more algorithmic approach.
THE PROJECT HAS BEEN MIGRATED TO GITHUB: https://github.com/itm/shawn
EngLab is a cross-compile mathematical platform with a C like syntax to be used by both engineers and users with small programming knowledge. It also enables the user and community to easily compile their own functions as shared objects.
RefineHMM refines an original hidden Markov model (HMM) to find an optimal fit
against the evolutionary group that the HMM models, and it does this using
through iterative database searches and incremental subsequent adaptation of
the seed set.
Elly is a reasoner for entailment and satisfiability checking of ELP knowledge-bases. It is written in java and relies on the IRIS Datalog reasoner (https://sourceforge.net/projects/iris-reasoner) for its implementation.
Anna is lightweight Java framework to build pipeline systems of any kind.
It will take care of recurrent needs such as dependency management, data serialisation and synchronization as well as parallelization of execution.
Ex-Crawler is divided into 3 subprojects (Crawler Daemon, distributed gui Client, (web) search engine) which together provide a flexible and powerful search engine supporting distributed computing. More informations: http://ex-crawler.sourceforge.net
WONDER is a software suite for using Wave Field Synthesis and Binaural Synthesis. It's primary platform is Linux, but it can be used under OSX too. Documentation is available at: http://swonder.wiki.sourceforge.net
superseded by SgpDec http://sgpdec.sf.net Java implementation of the holonomy algorithm for the algebraic hierarchical decomposition of finite state automata.
A basic quadratic equation calculator written in Java with a command-line interface. Handles fractions and imaginary roots. Thanks to Doug Lea at SUNY Oswego for his work on the Fraction class.
BS Eagle Project is an open source black-oil simulator. The goal of this project is to provide a free access to the modern oil simulator to study new methods of simulation. The project has a modular architecture and open to modifications and extensions.