Search Results for "java" - Page 39
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Showing 4378 open source projects for "java"
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VSViewer3D
3D Virtual Screening Viewer
This project is an interactive viewer for 3D virtual screening data. -
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IMPACT_S
Integrated Multiprogram Platform Analyze & Combine Tests of Selection
Maldonado E, Sunagar K, Almeida D, Vasconcelos V, Antunes A (2014) IMPACT_S: Integrated Multiprogram Platform to Analyze and Combine Tests of Selection. PLoS ONE 9(10): e96243. doi: https://doi.org/10.1371/journal.pone.0096243 -
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HRDAG
Framework for Hierarchical Graph Decomposition
This is a framework used to decompose hierarchical graphs, i.e.,graphs which were created from or contain a hierarchy of modules. Each module is reused several times in the hierarchy. This may be useful to reverse-engineer human constructs like electronic equipment, manufactured machines, or bureaucratic hierarchies; but also to decompose natural constructs like gene-relation or protein-relation nets. -
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Go From AI Idea to AI App FastAccess Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.
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This package contains different tools to add NLP capabilities for Lucene 4.x (it has been tested using Lucene version from 4.6.x to 4.8.1). Although it was originally developed for German, it is, mostly, language independent. It allows the user to lemmatize words to be indexed, to weight termy ba their parts of speech (e.g. weighting nouns mor hevaily than pronouns), and to add synonyms taken from GermaNet or a list you provide to the search index and thereby increase recall of lucene.
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Java Machine Learning Library is a library of machine learning algorithms and related datasets. Machine learning techniques include: clustering, classification, feature selection, regression, data pre-processing, ensemble learning, voting, ...
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GBDave's Pipe Size Calculator
HVAC Minimum Pipe Size Calculator
Starting off as a simple LISP command in AutoCAD this HAVC pipe size calculator was migrated to a standalone Java application. Calculates HVAC minimum pipe ID based on GPM and FPS for numerous fluid types (found in the fluid density chart on EngineeringToolbox.com) Includes a table to automatically calculate riser piping sizes per floor. Read the README.txt file included in PipeSize.zip for instructions. -
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BiMS
BiMS (biclustering for mass spectrometry data) is a Java application d
BiMS (biclustering for mass spectrometry data) is a Java application designed to allow the application of biclustering algorithms to mass spectrometry datasets. Users can load their MS datasets and apply different clustering and biclustering algorithms (current version includes Bimax and BiBit). In adition, users can load raw datasets (in mzML or mzXML formats) and preprocess them using MALDIquant package and MassSpecWavelet. -
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Network Analyzer
Analyze the network carateristics like Delay, Jitter, Packet loss etc.
...Once the eched packets arrives back to the sender, the analyzer will calculate all the related statistics like, packet loss, jitter throughput etc... NOTE: in order to receive the echo packets you must configure the receiving host to echo the incoming packets. In the next release i will provide another java application that just echo on an UDP port. -
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BioAnnote
Annotator Desktop application is able to annotate biomedical texts by
Annotator Desktop application is able to annotate biomedical texts by using different high-quality online resources, such as Medlineplus and Freebase. Users can introduce biomedical documents and obtain annotations for the relevant terms, such as diseases, symptoms and treatments. In addition, users can retrieve more detailed information for each recognized entity (making use of an integrated web browser), including related topics, external links, related bibliography and paper abstracts. -
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LGML
LGPL GML parser
...The willing of the project is to be a starting point useful for developers that need to parse GML objects in order to use them, for example, in the context of OGC catalogue projects. The library is compiled using Java 1.5 or 1.6. For now, supported inputs are: LineString, MultiLineString, MultiPoint, MultiPolygon, Point, Polygon, MultiSurface (in an experimental way: the only child object handled is Polygon). At the following URL: http://95.110.227.201:8080/lgml is exposed a minimal web interface in order to test it. -
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Mechaglot, Calculate Semantic Similarity
Calculate semantic similarity for any human and human-like languages
...This project models my previous project: https://sourceforge.net/projects/semantics/ Difference is, this project does not use any database and computes any Strings as an input. JAVA was the language of choice, due to availability of modelling tools. This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/. -Powered by WEKA, Classifier4J and SimMetrics. -
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uranus4abm
Universal Random Number Service for Agent-Based Models
The purpose of URaNuS (Universal Random Number Service) is to provide a common library for Agent-based models that allows modelers to define different random streams and/or generators for different model parts in order to investigate the influence of distinct model parts to stochasticity. It is also useful to manage random numbers in the interplay of multiple libraries. -
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ojmapcoloring
Map Coloring Plugin for OpenJump
This is a map coloring plugin intended for OpenJump. It uses the Five Color Theorem to color an OpenJump layer with five colors such that no two adjacent features have the same color. -
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EV3-JavaBrick
ROS node to control LEGO MINDSTORMS EV3
- Java SE 1.7 compatible - Can be run on both Windows/Linux PC - Can be run on Android devices(Tested on ASUS fonetab7, ASUS zenfone4, Samsung Galaxy S4) - Can be run on reflashed ARM-based AndroidTV sticks (Tested on MK808) - No custom firmware for EV3 brick - Supports about 15 EV3/NXT/HT sensors - Supports EV3 & NXT motors - Supports Android camera -
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OSM2SVG
Openstreetmap Layerd SVG Exporter
This Programm gets the Data from Openstreetmap and converts it to an Layerd SVG File for Inkscape. All conversion is don via a stylesheet. Here is defined what schould be shown and how it is displayed. You can get various styled Maps from the same Data with different sytelsheets. The Stylesheets are Javascript files and easy cusomizeable. (You should have a bit knowledge of OSM tags then it will be easyer to understand) -
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adLIMS
adLIMS: a Laboratory Information Management System with ADempiere
Many biological laboratories dealing with genomic samples are facing the problem of sample tracking, both for pure laboratory management and efficiency, and for internal policies, such as Good Laboratory Practices (GLP). Our laboratory exploits PCR techniques and next-generation sequencing (NGS) methods, to perform high-throughput integration site monitoring in different clinical trials and scientific projects, based on the delivery of therapeutic genes by viral vectors integrating into the... -
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Luscinia is a program for archiving and analyzing field sound recordings (especially of animals). It incorporates an interface to a database, spectrogram measurement algorithms, sound comparison algorithms, and statistical analysis.
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MNCubes
Research project to compute repeating patterns in discrete planes
A 2D line can be rasterized into a 8-connected sequence of pixels which exhibit repeating patterns of connected pixels. Likewise, a 3D plane can be rasterized into connected cubes. A 'rectangular' cut of m x n cubes is a (m,n)-cube. Given m and n, the goal of this project is to generate all the (m,n)-cubes for all the (integer) discrete planes, based on the intersection vertices on a Farey diagram. -
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Geoportal Server is a standards-based, open source product that enables discovery and use of geospatial resources including data and services.
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xAffect
Sensor Middleware
xAffect is a software framework for online recording, processing and storage of multi sensor data. It was developed at FZI Research Center for Information Technology, Karlsruhe, Germany. xAffect can be used as a flexible, customizable middleware between physiological sensors and applications which require online feature computation (e.g. biofeedback or affective computing). Moreover, it can also be used as a standalone application for data acquisition and visualization. -
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CLEiM
Cross Lingual Education in Medicine
CLEiM (Cross Lingual Education in Medicine) is an opensource version of an Intelligent System which extract concepts from medical texts and provides qualified information. It integrates information from various sources. This system has been developed by the Intelligent System Group GSI (http://www.esi.uem.es/gsi/) at UEM University. We do NER (Named Entity Recognition) based on GATE platform. The installation is simple, you can use it as a Web application. It has been tested under... -
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The Bio2RDF project aims to transforms silos of life science data into a globally distributed network of linked data for biological knowledge discovery. Bio2RDF creates and provides machine understandable descriptions of biological entities using the RDF/RDFS/OWL Semantic Web languages. Using both syntactic and semantic data integration techniques, Bio2RDF seamlessly integrates diverse biological data and enables powerful new SPARQL-based services across its globally distributed knowledge bases.
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picard
A set of tools for working with high-throughput sequencing data
A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team -
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javaGeom
A geometry library for Java
A java library for geometry applications. Provides a general framework for manipulating and creating geometric primitives, computing intersection points between shapes, composing them to create new shapes, and performing some measurements. Important note: the repository has now moved to GitHub: https://github.com/dlegland/javaGeom Please update bookmarks!
