Search Results for "gnu linux" - Page 32
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Showing 7564 open source projects for "gnu linux"
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F3DM
Finite Element Method on 3D Meshes
f3dmlib is a FEM library that can read, write and analyse 3D tetrahedral meshes, minimize a given functional, and refine the resulting meshes. The minimization is parallelized with OpenMP. Three main features in unstable 1.8.x version (available via GIT): quadratic elements, periodic boundary conditions, and the solver for scalar and electromagnetic wave equations. f3dmgeom is a collection of a few simple tools for creating surface meshes for tetgen. It can handle simple geometries only. -
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PBTK Optimizer
Application for optimization of parameters in PBTK models
Physiologically based toxicokinetic (PBTK) modeling offers great promise in environmental risk assessment, potentially speeding up dose-response studies while minimizing animal testing. Some limitations exist in the PBTK field, such as difficulty of model development and a lack of application specific software tools to help modelers. Some parameters used in PBTK models, such as tissue weights, are easily measure. Other parameters can be determined through in-vitro experiments or through... -
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MoPAC
The Modular Pipeline for the Analysis of CRISPR screens
To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page. -
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C++QED
A framework for simulating open quantum dynamics
C++QED is an application-programming framework for simulating open quantum dynamics in general. It has demonstrated the ability to simulate full Master equation of up to several thousand, and quantum trajectories of up to several hundred thousand dimensions. The basic idea is to allow users to build arbitrarily complex interacting quantum systems out of free subsystems and interactions (elements), and simulate their time evolution with a number of available time-evolution... -
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OSDLab
Open Source Digital Laboratory
Open Source Digital Laboratory compatible with Arduino project. This software consists from C++/Qt programs such as dotScope (https://dotscope.sourceforge.io) - is a scientific shell for live experiment, dlCAM (https://dlcam.sourceforge.io) - computer aided manufacture for Arduino and others projects, img-map (https://img-map.sourceforge.io) - image digitaizer. -
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SimpleLemmatizer
This program is for text lemmatization
It lemmatizes texts based on supplied model. The base model is for slovak texts and is created from Slovak National Corpus, copyright by Ľ. Štúr Institute of Linguistics, Slovak Academy of Sciences -
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Big Q Sort
An in-place external sort
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Grbl Overseer
A control software for GRBL-powered milling machines
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Mass-Up
MALDI-TOF data analysis tool
Mass-Up is an Open-Source mass spectrometry utility for proteomics designed to support the preprocessing and analysis of MALDI-TOF mass spectrometry data. Mass-Up includes several tools and operations to load, preprocess and analyze MALDI-TOF data. -
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iqr is a simulation software to graphically design and control large-scale neuronal models. Simulations in iqr can control real-world devices in real-time. iqr can be extended by new neuron, and synapse types, and custom interfaces to hardware.
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AdaAutoDiff
C++ Templates and Ada Package for Automatic Differentiation
Operators are overloaded so that a normal looking function definition provides access to not only evaluations of itself, but to evaluations of any of its analytic derivatives. Automatic differentiation means the user does not need to define the analytic expressions for all the various partial derivatives. It also means that those complex expressions are essentially calculated at compile time, and merely evaluated at runtime. First order derivatives only, forward... -
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Pigale is a graph editor and a C++ algorithm library essentially concerned with planar graphs. This software, particularly intended for graph theoretical research, includes new algorithms based on our recent theoretical researches.
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SparthMP
SparthMP is an ANSI-C math library for Multi-Precision calculations
SparthMP is an ANSI-C math library for Multi-Precision calculations, i.e. beyond float/double domain. It supports regulated accuracy of calculations. For algorithm design with this library you should have an understanding of rounding errors in math. -
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ZCAD
Simple CAD program
Project moved to https://github.com/zamtmn/zcad -
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PMCGPU
Parallel simulators for Membrane Computing on the GPU
Membrane Computing is a new research area (within Natural Computing) that aims to provide computing devices abstracted from the functioning and structure of living cells. These devices are called P systems. The objective of this project (PMCGPU) is to bring together all the researchers working on the development of parallel simulators for P systems, specially those using the GPU (e.g. CUDA, OpenCL, etc). Other parallel platforms are also welcome (multicore and manycore, FPGAs,... -
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PsPM
A matlab suite for Psycho-Physiological Modelling
PsPM is a powerful tool for psychophysiological modelling. It includes linear convolution models and non-linear models for SCR, and allows for modelling of other signals, too. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although... -
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EasyNetVars
Data Exchange between CoDeSys Devices and .NET via Network Variables
Library (.DLL) for Data Exchange between CoDeSys Devices and .NET and Step 7 via Network-Variables written in C# V1.0: Bugfixes New 02/2015: Read and Write Operations possible for more than 255 byte. - Read and Write Operations CoDeSys -> .NET - Method to create .GVL-File to import in CoDeSys Example in Step 7 (TIA-Portal) for Data-exchange between CoDeSys and Siemens S7 Devices CoDeSys -> Step7 (S7-1200): https://sourceforge.net/projects/easynetvars/files/NetVarsStep7/ See... -
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PPIXpress
specific protein interaction networks from transcript expression
Although protein-protein interaction networks are an ubiquitous component of modern systems biology, comparatively few efforts have been made to tailor their topology to the actual cellular condition under study. Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms’ regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal... -
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DSPatch
The Refreshingly Simple C++ Dataflow Framework
Webite: http://flowbasedprogramming.com DSPatch, pronounced "dispatch", is a powerful C++ dataflow framework. DSPatch is not limited to any particular domain or data type, from reactive programming to stream processing, DSPatch's generic, object-oriented API allows you to create virtually any dataflow system imaginable. *See also:* DSPatcher ( https://github.com/MarcusTomlinson/DSPatcher ): A cross-platform graphical tool for building DSPatch circuits. DSPatchables (... -
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QMForge reads output from various quantum mechanical calculations and provides tools for analyzing these results. Specifically, population (Mulliken and C-squared), fragment, and charge decomposition analyses are available. See https://qmforge.net for more info.
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