Search Results for "open source assembly software source code" - Page 26
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Showing 4364 open source projects for "open source assembly software source code"
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miRprimer
Automatic design of primers for miR-specific RT-qPCR
miRprimer designs primers for PCR amplification of microRNAs as described (Busk (2014). A tool for design of primers for microRNA-specific quantitative RT-qPCR. BMC Bioinformatics. 15, 29) for use with the method miR-specific RT-qPCR (Cirera, S., and Busk, P.K. (2014). Quantification of miRNAs by a simple and specific qPCR method. Methods in Molecular Biology. 1182, 73-81.). The program was written in Ruby and is available as source code for developers and as an .exe file for easy use. -
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Peptide Vaccine Analysis Tool (PVAT) is an optimization software that predicts the best possible peptide stretches in a given protein sequence based on two factors: 1. the surface exposure of the peptide stretches, and 2. their susceptibility to mutation.
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Tahoe is a research-oriented platform for the development of numerical methods and models for the simulation of complex material behavior.
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chklinks is a non-threaded Perl link checker. It helps finding broken links on your website. It does not raises many simultaneously connections for its job, run out of the resources and crash your system in a moment.
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PythonToolkit (PTK) is an interactive environment for python. It was designed to provide a python based environment similiar to Matlab for scientists and engineers however it can also be used as a general purpose interactive python environment.
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korpus
Corpus Linguistics Software
Some software for Corpus Linguistics, which includes Corpus Text Editor, Web-based search, etc. This project created for Belarusian Corpus, but can be used for other languages with some adaption. -
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Neural Networks Collection
Neural Networks Collection
This project implements in C++ a bunch of known Neural Networks. So far the project implements: LVQ in several variants, SOM in several variants, Hopfield network and Perceptron. Other neural network types are planned, but not implemented yet. The project can run in two modes: command line tool and Python 7.2 extension. Currently, Python version appears more functional, as it allows easy interaction with algorithms developed by other people. -
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Homie for ESP8266
ESP8266 framework for Homie, a lightweight MQTT convention
An Arduino for ESP8266 / ESP32 implementation of Homie, an MQTT convention for the IoT. This branch of Homie for ESP8266 implements Homie 3.0.1 and adds support for ESP32. PlatformIO is an open-source ecosystem for IoT development with the cross-platform build system, library manager and full support for Espressif ESP8266 development. It works on the popular host OS, Mac OS X, Windows, Linux 32/64, Linux ARM (like Raspberry Pi, BeagleBone, CubieBoard). Available in the PlatformIO registry.... -
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GeoSolver
A Python library for solving geometric constraint problems
GeoSolver is a Python library for solving geometric constraint problems. A graphical testing and demostration application, the Geometric Constraint Workbench is included with the software. -
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EasyModbusTCP/UDP/RTU .NET
Modbus TCP, UDP and Modbus RTU client/server library
Modbus TCP, Modbus UDP and Modbus RTU client/server library for .NET Supports Function Codes: - Read Coils (FC1) - Read Discrete Inputs (FC2) - Read Holding Registers (FC3) - Read Input Registers (FC4) - Write Single Coil (FC5) - Write Single Register (FC6) - Write Multiple Coils (FC15) - Write Multiple Registers (FC16) V5.6: Upload lates version - This will probably the last version for .NET Framework 4.0 - The next Version will be based on new .NET5 and... -
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This project hosts a library and tools for sharing simulation experiments encoded using SED-ML.
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OpenFrames
Real-time interactive 3D graphics API for scientific simulations
OpenFrames has moved its primary development repository to GitHub! Everything else will follow. Get it at https://github.com/ravidavi/OpenFrames/wiki OpenFrames is an Application Programming Interface (API) that allows developers to provides the ability to add interactive 3D graphics to any scientific simulation. A simulation developer can use OpenFrames to specify what they want to visualize, without having to know any details of computer graphics programming. OpenFrames is currently... -
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bioweb
polyglot language framework to analyze genetic data
polyglot framework using Python/C++/JavaScript to fast develop applications to analyze biological sequences -
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ANDTool
Analysis Nuclei DAB (AND) Tool
Analysis Nuclei DAB (AND) Tool is a Graphical User Interface (GUI) to analyse microscopy images representing cells with nuclei stained using DAB dyes. The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function: "ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB" Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing... -
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XIVO
X Inertial-aided Visual Odometry
XIVO is an open-source repository for visual-inertial odometry/mapping. It is a simplified version of Corvis [Jones et al.,Tsotsos et al.], designed for pedagogical purposes, and incorporates odometry (relative motion of the sensor platform), local mapping (pose relative to a reference frame of the oldest visible features), and global mapping (pose relative to a global frame, including loop-closure and global re-localization, this feature, present in Corvis, is not yet incorporated in XIVO).... -
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Reproducible-research
A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.
In this tutorial, we describe a workflow to ensure long-term reproducibility of R-based data analyses. The workflow leverages established tools and practices from software engineering. It combines the benefits of various open-source software tools including R Markdown, Git, Make, and Docker, whose interplay ensures seamless integration of version management, dynamic report generation conforming to various journal styles, and full cross-platform and long-term computational reproducibility. The workflow ensures meeting the primary goals that 1) the reporting of statistical results is consistent with the actual statistical results (dynamic report generation), 2) the analysis exactly reproduces at a later point in time even if the computing platform or software is changed (computational reproducibility), and 3) changes at any time (during development and post-publication) are tracked, tagged, and documented while earlier versions of both data and code remain accessible. -
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Robotics Toolbox for MATLAB
Robotics Toolbox for MATLAB
This toolbox brings robotics-specific functionality to MATLAB, exploiting the native capabilities of MATLAB (linear algebra, portability, graphics). The Toolbox uses a very general method of representing the kinematics and dynamics of serial-link manipulators as MATLAB® objects – robot objects can be created by the user for any serial-link manipulator and a number of examples are provided for well-known robots from Kinova, Universal Robotics, Rethink as well as classical robots such as the... -
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The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
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ExRandom
Sampling exactly from the normal and exponential distributions
ExRandom is a small header-only C++11 library for exact sampling from the normal, exponential, and discrete normal distributions (provided that the underlying generator is perfect). This library provides an implementation of the algorithms described in C. F. F. Karney, Sampling exactly from the normal distribution, ACM Trans. Math. Software 42(1), 3:1-14 (Jan. 2016), https://doi.org/10.1145/2710016, https://arxiv.org/abs/1303.6257. -
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GLPK for Java
Java language binding for the GNU Linear Programming Kit (GLPK)
GLPK for Java provides a Java language binding for the library GLPK. GLPK is a proven solver for linear and mixed integer mathematical programming problems. For Windows binaries see project GLPK for Windows (http://sourceforge.net/projects/winglpk/). -
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OpenDAFF
Directional Audio File Format
OpenDAFF is a free, open-source software package for directional audio data - like the directivity of microphones, speakers, as well as head-related transfer functions (HRTFs) -
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DigiOz .NET Portal
ASP.NET MVC Based Portal CMS System to Create an Instant Website
DigiOz .NET Portal is a FREE web based portal CMS system written in ASP.NET MVC 5 in C# which uses a Microsoft SQL Database to allows webmasters to setup and customize an instant website for either business or personal use. List of Technologies used: - ASP.NET MVC 5 - Microsoft SQL Server - Bootstrap - HTML 5 - jQuery Demo Site: http://digioznetportal.digioz.net/ Source Code: https://sourceforge.net/p/digioznetportal/codenew/ci/master/tree/ Installation Instructions:... -
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Driver libraries and applications for the Hirst Magnetic Instruments GM08, GM05 and VGM01 Gaussmeters. Supplied code gives an interface library for Windows and Linux systems. Provices Excel example, labview example, .NET sample and documentation.
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ModbusPal - a Java MODBUS simulator
Modbus slave simulator
ModbusPal is a project to develop a PC-based Modbus simulator. Its goal is to reproduce a realistic environment, with many slaves and animated register values. Almost everything in ModbusPal can be customized and controlled by scripts. -
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jarduino
Generates C++ code from Arduino .dbc files
jarduino creates C++ code from .dbc files suitable for import into the Arduino IDE. It generates C structures representing each message and functions to build and parse the messages. It also provides a visualisation of the message, mapping the signals to the bits in the data message.