Showing 296 open source projects for "pdf tool python"

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  • 1
    Avogadro

    Avogadro

    An intuitive molecular editor and visualization tool

    Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.
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    Downloads: 702 This Week
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  • 2

    MetRFinder

    Detection of Heavy Metal Resistance Genes from Bacterial Proteomes

    MetRFinder is a standalone GUI-based bioinformatics tool developed in Python for rapid identification of heavy metal resistance genes from bacterial proteomes. The software integrates DIAMOND BLASTP with BacMet Experimental and BacMet Predicted databases to enable high-throughput screening of protein FASTA files. Users can analyze single or multiple bacterial isolates through an intuitive graphical interface without requiring command-line expertise.
    Downloads: 0 This Week
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  • 3
    CiteFlow

    CiteFlow

    Desktop research workspace for PDFs, notes, citations, bibliographies.

    CiteFlow is a focused desktop research workspace for students, researchers, and academic writers who want to manage PDFs, notes, citations, and bibliographies in one place. Create project-based workspaces for essays, articles, reports, literature reviews, and long-form research. Import PDFs, read them inside the app, search within documents, compare files side by side, highlight key passages, and add page-based notes. CiteFlow can assist with DOI metadata detection, keeps citation history...
    Downloads: 2 This Week
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  • 4
    Repeater-START

    Repeater-START

    Showing The Amateur radio Repeaters Tool

    Repeater-START (Showing The Amateur Repeaters Tool) is an app to view nearby ham radio repeaters. It runs on Windows, Android, Ubuntu Linux and Raspbian for Raspberry-pi, Librem Phone, Pinephone/Manjaro Linux etc.
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    Downloads: 89 This Week
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  • 5
    OdooPLM

    OdooPLM

    A Full PLM system based on odoo

    OdooPLM is a full open source PLM system built on Odoo. Manage 3D models, 2D drawings, BOMs, revisions and documents directly inside Odoo, with a Windows connector for the most common CAD systems. This SourceForge project hosts the WINDOWS CAD CONNECTOR. One connector works with all supported Odoo versions (v11 and later) — no need to match it to your server. Download it from the https://sourceforge.net/projects/openerpplm/files/Client/Stable/ The Odoo server modules are NOT...
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    Downloads: 32 This Week
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  • 6
    ChemCanvas

    ChemCanvas

    Chemical structure drawing tool

    This is targeted to be the most intuitive opensource 2D chemical drawing tool. You can draw organic chemical structures and reactions very easily and quickly. Available to download for Windows and Linux (AppImage, Flatpak, Snap)
    Downloads: 9 This Week
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  • 7
    Tellurium

    Tellurium

    Model, simulate, and analyze biochemical systems using one tool.

    Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support.
    Downloads: 4 This Week
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  • 8

    Fastq-Fasta Converter

    A bioinformatics tool that converts Fastq into Fasta

    Fastq-Fasta Converter is a desktop application that converts Fastq files into Fasta files.
    Downloads: 0 This Week
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  • 9

    MolPrep

    RDkit-based Molecule Optimization Tool (CLI) in python.

    MolPrep is a powerful utility application designed to streamline the preparation and refinement of molecular geometries. With the help of RDKit, this tool enables users to load, clean, standardize, and optimize molecular structures effortlessly. Its robust design ensures scalability and efficiency, making it ideal for chemoinformatics workflows.
    Downloads: 0 This Week
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  • 10
    CircuiTikZ Generator

    CircuiTikZ Generator

    This software is a tool for designing electronic circuits using LaTeX.

    This software is a tool for designing electronic circuits using LaTeX. With an intuitive graphical interface, you can create complex circuits quickly and easily, while the LaTeX code generator translates your designs into code compatible with the LaTeX circuitikz library.
    Downloads: 2 This Week
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  • 11
    SDF Merger

    SDF Merger

    Desktop application for merging multiple SDF files into a single SDF

    SDF Merger is a Python-based desktop application designed for chemists and researchers working with molecular data. The tool provides an graphical interface to merge multiple SDF files containing chemical structures and properties into a single consolidated file. Key Features: 1. User-Friendly GUI: Clean, professional interface with corporate branding 2.
    Downloads: 1 This Week
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  • 12
    ANYstructure

    ANYstructure

    GUI based steel structure calculation and optimization tool.

    ...Pressures on external hull (or any other generic location) is defined by specifying equations. You can optimize single plate/stiffener field or multiple. PYTHON: PIP install ANYstructure Code: https://github.com/audunarn/ANYstructure
    Downloads: 3 This Week
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  • 13
    TOPCEE

    TOPCEE

    Python GUI tool for estimating plant CAPEX, OPEX, and profitability

    TOPCEE (Toyese Oyegoke Process Cost & Economic Evaluator) is a GUI-based Python application designed to assist chemical engineers, researchers, and students in evaluating the profitability of chemical/process plants. The app calculates capital and operational expenditures (CAPEX & OPEX) and provides key profitability metrics such as: **ROI (Return on Investment) **IRR (Internal Rate of Return) **NPV (Net Present Value) **Payback Period (Discounted and Non-Discounted) **Benefit-Cost Ratios Users input plant-specific values like feedstock costs, operating time, product price, and equipment cost — and the tool generates real-time visualizations and results. ...
    Downloads: 1 This Week
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  • 14
    ...It's core function is to generate simulation engine instructions based on user input. However, it also offers extra functionality via applications and utilities developed by others. Electronic Design Automation (EDA) tool suites are used to provide schematic capture and editing, and schematic to netlist conversion. Waveform data viewers are used to display simulation results and PDF viewers to display user manuals.
    Downloads: 13 This Week
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  • 15
    CAIRO for AERMOD

    CAIRO for AERMOD

    AERMOD, visualisation, input, modelling and compiling tool

    CAIRO for AERMOD v1.1 by MSc Dominik Subotić Simplified training software Avaliable: www.sourceforge.net/projects/cairo-for-aermod/ QGIS plugin: CAIROforAERMOD (Coming 2025.) Tutorial: https://www.youtube.com/watch?v=DZnsJuu1zLc AERMAP, AERMOD and AERPLOT analysis tool and input file compiler. Features: Automatic input by copying coordinates (Google Maps or text) and automatic conversion to UTM. Sources are automatically visualised in Google Earth. Input is done through user...
    Downloads: 5 This Week
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  • 16
    JaxoDraw

    JaxoDraw

    JaxoDraw: Feynman Diagrams made easy!

    JaxoDraw is a tool to generate Feynman diagrams in a mouse click-and-drag fashion. Graphs can be exported to a variety of graphics formats and arbitrary latex code can be used for labels to produce high-quality publishing-style figures.
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    Downloads: 47 This Week
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  • 17
    RetroScheme- Get Your Retrosynthesis

    RetroScheme- Get Your Retrosynthesis

    - RetroScheme is used for molecule sketching and retrosynthesis

    RetroScheme was specifically designed to help Chemists in knowing potential starting material through retrosynthetic analysis. The App is basically a GUI wrapper for the library Aizynthfinder from Astrazeneca.. - The App is coupled with molecular sketching tool to sketch your compound - This was made to be easy for the user and can be used endlessly to assist in potential new drug synthesis
    Downloads: 4 This Week
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  • 18

    DataPrep

    Python-based data preprocessing tool

    DataPrep v0.2 is a Tkinter-based GUI application/tool designed to assist users in data preprocessing, multicollinearity removal, and feature selection for a wide range of applications in Cheminformatics, Bioinformatics, Data Analysis, Feature Selection, Molecular Modeling, Machine Learning, and Quantitative-structure-property relationship (QSPR) studies. It includes functionality to load, process, and save datasets with support for different preprocessing & multicollinearity removal...
    Downloads: 0 This Week
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  • 19
    GeigerLog

    GeigerLog

    Python program for Geiger counters and Environmental Sensors

    GeigerLog is a combination of data logger, presenter, and analyzer, and is now released in version 2.1! Based on Python (Version 3), it runs on Linux, Windows, Macs, Raspberry Pi, and other. GeigerLog is WiFi-enabled for servers and clients; it can be monitored by SmartPhone. Initially developed for Geiger counters, it is now a more universal tool, which equally well handles data like temperature, air-pressure, humidity, CO2. Continues to support Geiger counters like GQ Electronic's GMC-300/500/600 , RadMon, RadPro, Gamma-Scout, audio-click and other low-cost Geiger counters, IoT devices, I2C based sensors, GQ EMF devices. ...
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    Downloads: 55 This Week
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  • 20
    Euler Math Toolbox

    Euler Math Toolbox

    Numerical and Symbolic Math Tool

    Euler is a powerful all-in-one numerical software and includes Maxima for seamless symbolic computations. Euler supports Latex for math display, Povray for photo-realistic 3D scenes, Python, Matplotlib and C for scripting, and contains a full programming language. Features include libraries for numerical algorithms, optimization, plotting in 2D and 3D, graphics export, a complete help system, tutorials and examples. Euler runs in Windows natively, or in Linux via Wine. It is completely...
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    Downloads: 16 This Week
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  • 21

    SimFPGA

    VHDL Verification and Simulation Tool

    SimFPGA is a graphical user interface (GUI) tool designed to facilitate the simulation of VHDL projects. It enables users to select VHDL source files and testbenches, configure library and standard settings, and run simulations using GHDL. Additionally, it allows visualization of waveforms through GTKWave. SimFPGA elaborates the project files using GHDL and builds the VHDL project before simulating it. This ensures code verification without the need for additional compilation tools. If...
    Downloads: 1 This Week
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  • 22
    STRIKER-GUI

    STRIKER-GUI

    Refine the spectral library to enhance its completeness and coverage.

    STRIKER is a tool for correcting spectra with missing or incorrect adduct annotations. It also enables efficient construction of an HMDB-based spectral library and extraction of sublibraries from large spectral libraries.
    Downloads: 0 This Week
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  • 23
    Abacus software

    Abacus software

    Software to control and analyze Tausand Abacus coincidence devices

    Abacus Software is a specialized tool for controlling and analyzing Tausand Abacus devices (AB1002, AB1004, AB1502, AB1504, AB2502, and AB2504). It enables precise measurement of temporal coincidences with up to 2-nanosecond resolution, and real-time visualization of count data from one, two, or three channels simultaneously. The software includes advanced features such as adjustable line width, sampling time configuration, direct device settings control, and the ability to save both raw...
    Downloads: 4 This Week
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  • 24
    LabRPS

    LabRPS

    Random phenomena generator

    This is an official mirror of LabRPS. Code and release files are primarily hosted on https://github.com/LabRPS/LabRPS and mirrored here LabRPS aims to be a tool for the numerical simulation of random phenomena such as stochastic wind velocity, seismic ground motion, sea surface ... etc. It can be in a wide range of uses around engineering, such as random vibration or vibration fatigue in mechanical engineering, buffeting analysis in bridge engineering.... LabRPS is mainly to assist...
    Downloads: 1 This Week
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  • 25
    PhiPsi

    PhiPsi

    An eXtended Finite Element Method (XFEM) Software.

    PhiPsi is a 2D and 3D computational solid mechanics program, which involves the extended finite element method (XFEM), as well as the finite element method (FEM). PhiPsi is written in Fortran and compiled using the GNU Fortran compiler (gfortran). PPView is a visualization tool for PhiPsi. PPView can be used to import Abaqus inp file, view the model defined in the PhiPsi keywords file (*.kpp), edit PhiPsi keywords file, perform a PhiPsi simulation, and view the simulation result files...
    Downloads: 5 This Week
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