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  • 1
    Charmol

    Charmol

    Program for molecular graphics

    Charmol is a cross-platform GUI/command-line based program for making high-quality pictures of molecular structures, nowadays working on Linux, MacOS and Windows. As output, it produces POV-Ray rendered images or files in VRML format. Charmol is capable of making pictures containing: - from small- to large-size molecules - more molecules together (different settings possible) - orbitals using molden and fchk files (GTO functions up to 'h' angular momentum supported) - surfaces using gaussian cube files (also color-mapped surfaces according to potential) - schematic representation of vibrations using arrows - user-defined arrows representing vectorial properties - measuring gauges - combinations of these features (more orbitals together, orbitals and arrows together etc.) ...
    Downloads: 0 This Week
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  • 2
    BOINC Control Script for Linux/BSD
    A small BOINC control script for Linux and the BSDs. Useful if there's no GUI on the crunching system yet you still want to easily monitor and control BOINC. Requires BOINC version 7.22 or higher.
    Downloads: 0 This Week
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  • 3
    Ymap - Yeast Mapping Analysis Pipeline

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    ...The YMAP pipeline automatically illustrates genome-wide information in a single intuitive figure and is readily modified for the analysis of other categories of data and other pathogen species with small genomes.
    Downloads: 0 This Week
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  • 4

    denovo_solid_pipeline

    Pipeline for small genome assembly using SOLiD sequencing technology

    denovo_solid_pipeline (DSP) is a semi automated pipeline for short genome assembly using SOLiD sequencing data. The main features of the pipeline are the optimization of the number of read-correction runs and computational resources via dynamic programming. DSP also has the advantage over the currently available pipeline (denovo2) of generating more contigs suitable for further assembly steps, increasing the chances of detecting sequencing errors and/or polymorphic sites.
    Downloads: 0 This Week
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  • 5
    osm2postgresql is a Linux script loading openstreetmap data into a postgresql database setting up if needed a server & database (postgis+hstore). Advanced processing is performed, easing rendering. http://wiki.openstreetmap.org/wiki/Osm2postgresql
    Downloads: 0 This Week
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  • 6
    The aim of MIEX (Metadata and Information Extractor from small XML documents) is to create a wrapper for the Stanford Parser, to extract and store metadata (syntactic structures, relationships among words...) from simple XML documents.
    Downloads: 0 This Week
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