Search Results for "shell script library"
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Showing 68 open source projects for "shell script library"
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tacklelib
The C++11 library, msvc2015u3/gcc5.4 + cmake,python,bash,vbs modules
https://sourceforge.net/p/tacklelib/tacklelib/ci/master/tree/README.md https://sourceforge.net/p/tacklelib/tacklelib/ci/master/tree/README_EN.txt https://sourceforge.net/p/tacklelib/tacklelib/ci/master/tree/README_EN.deps.txt https://sourceforge.net/p/tacklelib/tacklelib/ci/master/tree/README_EN.linux_x86_64.txt https://sourceforge.net/p/tacklelib/tacklelib/ci/master/tree/changelog.txt -
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BRL-CAD
Open Source Solid Modeling CAD
BRL-CAD is a powerful cross-platform constructive solid geometry solid modeling system that includes an interactive geometry editor, ray-tracing for rendering & geometric analyses, network distributed framebuffer support, image & signal-processing tools. -
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SPELL
Satellite Procedure Execution Language and Library
SPELL is a framework composed of an integrated environment for the development and execution of satellite automated procedures. It is capable of running any procedure via different Ground Control System and for any spacecraft. The goal of SPELL is to have a powerful and readable automation language, which can be shared across Satellite Operators and Satellite Manufacturers. If we all use the same language, the cost and the risk associated with automated procedures will go down! SPELL... -
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MAF
Bash Framework to combine many preprocessing and alignment tools
DNA and RNA nucleotide sequences are an ubiquitous element of all biological cells and are serving on one hand as a comprehensive library of capabilities for the cells and on the other as an impressive regulatory system to control cellular function. The presented multi-alignment framework (MAF) should give researchers a simple sequence alignment platform as a functional template, flexible enough to adjust all steps but also comprehensive enough to join many different tools and custom... -
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A small BOINC control script for Linux and the BSDs. Useful if there's no GUI on the crunching system yet you still want to easily monitor and control BOINC. Requires BOINC version 7.22 or higher.
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Amplicon_Sequencing_Worfklow
Analyzing amplicon data from sequences to stats
...I created this workflow to create a consistent set of methods for analyzing amplicon sequence data, from when you first receive the sequence data to statistical analyses & data visualization. All you need is to have the latest version of R installed, some experience with the command line & shell, and enough memory to run all of the programs. There are also instructions provided in case you are running these analyses via a computing cluster/Slurm workload manager. You can choose to go through the workflow using either an Rmd script, an html file, or a PDF, or via the homepage link provided. If you have questions or concerns, please don't hesitate to reach out. ... -
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MLPACK is a C++ machine learning library with emphasis on scalability, speed, and ease-of-use. Its aim is to make machine learning possible for novice users by means of a simple, consistent API, while simultaneously exploiting C++ language features to provide maximum performance and flexibility for expert users. * More info + downloads: https://mlpack.org * Git repo: https://github.com/mlpack/mlpack
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SOLIDWORKS for Linux
This is a project, where I give you a way to use SOLIDWORKS on Linux
SOLIDWORKS-for-Linux is a user-contributed script and environment setup project that enables running SOLIDWORKS, the professional 3D CAD software, on Linux via Wine and custom configurations. Since SOLIDWORKS is officially only available for Windows, this project offers a comprehensive solution including setup scripts, dependencies, and workarounds to help engineers, designers, and students use it on Linux-based systems. While not officially supported, it aims to bridge the platform gap with... -
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BioModels Database is a data resource that allows biologists to store, search and retrieve published mathematical models of biological interests. Models presented are annotated and linked to relevant data resources and are available in various format
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F3DM
Finite Element Method on 3D Meshes
f3dmlib is a FEM library that can read, write and analyse 3D tetrahedral meshes, minimize a given functional, and refine the resulting meshes. The minimization is parallelized with OpenMP. Three main features in unstable 1.8.x version (available via GIT): quadratic elements, periodic boundary conditions, and the solver for scalar and electromagnetic wave equations. f3dmgeom is a collection of a few simple tools for creating surface meshes for tetgen. It can handle simple geometries only. -
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LBXR - LOAD BLAST XML RESULTS O sistema permite que sejam importados resultados obtidos por meio de pesquisas de similaridade a partir do BLAST, com resultados gerado no formato XML para o banco de dados relacional MariaDB ou MySQL.
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abumpack
Fortran library with the Abaqus user material subroutines UMAT/VUMAT
This library contains several of user material subroutines for implicit quasi-static (UMAT) and explicit dynamic (VUMAT) versions of the Abaqus solver. The project web site: http://abumpack.sf.net. The Abaqus is a proprietary finite element (FE) code ( http://www.3ds.com/products-services/simulia/products/abaqus/). Users can write subroutines for use with the Abaqus. Linear elastic, isotropic hardening plasticity, Gurson-Tvergaard-Needleman (GTN), Rousselier constitutive models are... -
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Logic Lab
This is a suite of mathematical software solvers GUI
This is a suite of mathematical software solvers interface on DLV and other command-line solvers. It helps researchers and students to better comprehend their declarative definitions published on papers. The user can have links to the related papers and to the software of the corresponding definitions. -
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ProtPOS
Prediction of PROTtein Preferred Orientation on a Surface
ProtPOS is a self-contained, lightweight, and easy-to-use software package for predicting the preferred orientation of protein on a given surface upon initial adsorption. It searches quickly for the low energy protein poses in all translational and rotational degrees of freedom of the protein with respect to the surface using particle swarm optimization. Each successful run returns the lowest energy orientation of the protein on the surface in PDB format, which is readily used for MD... -
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MCCCS
Multi Channel Classification and Clustering
Here we present an image-based Multi Channel Classification and Clustering System (MCCCS). It is an generalized, script-based classification system for processing various kinds of image data. Due to the modular design, individual processing-components can be easily adapted, extended or exchanged by own extensions. See project website for installation instructions. -
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XmgFit
A wrapper to use Xmgrace's curve fitting capability on the shell.
XmgFit is a wrapper for Xmgrace (*) allowing to use comfortable the non-linear curve fitting capability of Xmgrace from the command line. Therefore the capabilities are limited by xmgrace. Please refer to the xmgrace users guide for more details. It is also handy to incorporate in shell scripts. The -s or --scripty option returns all result values xmgrace provide in an EVALuable format to make them easy available in shell scripts. *) http://plasma-gate.weizmann.ac.il/Grace/ -
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Libraries for integration of atmospheric trajectories. Includes a basic trajectory integrator, contour advection codes and semi-Lagrangian tracer simulations.
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IRST LM Toolkit
A toolkit for language modeling.
IRSTLM is no more supported on SourceForge. Please visit the new IRSTLM official website: http://hlt-mt.fbk.eu/technologies/irstlm IRSTLM: A tool for the estimation, representation, and computation of statistical language models. IRSTLM, the IRST Language Modeling Toolkit, features algorithms and data structures suitable to estimate, store, and access very large n-gram language models. Our software has been integrated into a popular open source Statistical Machine Translation... -
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**(9 march 2016) this project is continued on github : http://jaapkroe.github.io/polypy ** Python script to analyze (shortest-path) rings in structures read from xyz-files. It can be useful for example to identify defects in crystal structures or molecules.
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gsl-pt_BR
manual da gsl em pt-BR
Manual da Gnu Scientific Library em português do Brasil. O manual possui código fonte no formato texinfo. -
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A script for parsing a LaTeX snippet into png. Very useful for those who wish to create quick equations for either presentations or websites. The latex2png script comes in three flavors.
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ANTS on CONDOR
Using buildtemplateparallel.sh from ANTS on Condor
*** NOTE: Any further updates or debugging will be made through github. Please go to: https://github.com/solleo/ANTs-Condor - SG (2014-07-22) Advanced Normalization Tools (ANTS; https://sourceforge.net/projects/advants/) is an extremely sophisticated image registration tool, which is often used in human neuroimaging analysis. As creating an unbiased study-specific template with a large number of subjects is highly demanding in computational load, parallelization is implemented in... -
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Full featured free PACS based on dcm4chee and mysql, with remote web accession available for Linux in Debian packaging format for x86 32 and 64 bit processors. (KEYWORDS: PACS,DICOM,HL7,WORK LIST)
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That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
