Search Results for "planning"
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Showing 19 open source projects for "planning"
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NOFI ranking
The Non-Outlier Fragment Ion ranking for enhaced DIA quantification
The NOFI ranking algorithm has been developed to assign low priority to fragment ions affected by interference. The implementation is an R script that can be customized. A future version will contain a modular version. The outline is as follows: 1) The input contains the list of SWATH fragment ion XICs from the identified and quantified peptides by software tools such as Skyline and OpenSWATH. 2) The first step in NOFI is the computation of the 4 attributes (RTd, FWHMd, IRd and IRrep)... -
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swathTUNER
Software tool for optimizing data-independent acquisition methods
SwathTUNER combines usability and flexibility for the selection of different SWATH data acquisition strategies to address the requirements of multiple experimental conditions. It can be used for any acquisition instrument, including FT-based analyzers, where the same principles with respect to variable precursor isolation windows apply. Fixed and variable windows based on equalizing the distribution of either the precursor ions or the total ion current within each window can be created. -
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Chinese I Ching R Algorithms
Chinese I Ching Algorithms implemented with R programming
I Ching offers an idea to summary the world by constructing functional mappings in finite groups. Much of ancient Chinese natural and social science grew from its concepts as root. The derived theories like "Eight Diagrams", "Five Elements" became the foundation of nearly all academic fields in acient Chinese. As a result, the theories are also the high concentration of many practical and statistical experience in China during her thousands-of-year history. This project tries to realize... -
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Hackathon for Outbreak Analysis in R
A hackathon for the analysis of disease outbreaks in R
This is the sourceforge project supporting "Hackout: A hackathon for the analysis of disease outbreaks in R". It includes a repository for the collective development of the project's R package. -
Red Hat Enterprise Linux on Microsoft AzureRed Hat Enterprise Linux (RHEL) on Microsoft Azure provides a secure, reliable, and flexible foundation for your cloud infrastructure. Red Hat Enterprise Linux on Microsoft Azure is ideal for enterprises seeking to enhance their cloud environment with seamless integration, consistent performance, and comprehensive support.
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MyNook
A machine learning system for supervised document classification
An open source system for supervised document classification based on statistical machine learning techniques. On the contrary of the state of art classification techniques, MyNook just requires the title of the document, not the content itself. -
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Perl code scafflod for the automatic execution of main Next Generation Sequencing data processing and analysis.
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This project aims at developing R-based Software for the analysis of typical neuroscientific data. These will include time resolved bootstrap tests and fitting and testing of psychometric functions.
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ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
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Shift, the browser that merges all of your web apps into one powerful window.Streamline everything you do online when you install Shift and access thousands of apps without leaving your browser. Connect all of your Gmail, Outlook, and Office 365 accounts and manage everything from one centralized window. Build out your Shift browser with apps that integrate seamlessly so you have ultra-fast access to all the tools you use to stream, shop, work, browse, and stay connected. Shift brings it all together.
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Neural Network for physicists. A flexible code in which the user has high control of the network parameters. The code provides a chi^2 cost function. The code accepts user-defined cost function and neuron activation functions.
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CAStoolsBazaar is a collection of software tools for actuaries around the world who are looking for a little more fun while doing their work.
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The Life Cycle Assessment Spreadsheet allows you to calculate carbon footprints and other environmental impacts for given product systems. Use requires basic skills in LCA and matrix algebra, but rewards effort with professional analytical tools.
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MGARCH is a software library for R-Project to simulate and estimate various MGARCH processes. This project also provides convenience tools for preparing data, summarizing and visualizing results, prediction and documentation.
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A header file (cexcept.h) that provides Try/Throw/Catch macros similar to those available in C++ for error handling.
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depmix is a package for the R statistical computing environment, to fit (multigroup) mixtures of latent Markov models on mixed categorical and continuous (timeseries) data
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Quick reference for switching between mathematical computation environments for computer algebra, numeric processing and data visualisation. Examples are Matlab, IDL, SPlus, and their open-source counterparts Octave, Scilab, Python+NumPy and R.
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Built with R, this code allows the user to simulate the game of basketball. While the main focus is on simulating the NBA, the code provides a framework for simulating other leagues by modifying the default set of rules.
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An R package for visualising global scale data by easy import & display of country level & gridded data. Rworldmap will also provide access to existing datasets from earth to social sciences and facilitate their combination to provide insights for policy
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R package kOO
implementing k-spatial entropy methodology
The R package to be built aims at implementing what I did in a few scripts for the preparation of the papers I published in CaGEO and TGIS (see below). Basically this is related to the computation of the distribution of k co-occurrences of spatial events (generalising the contiguity distributions - 2 co-occurrences at distance 0) to derive spatial clustering statistics (mainly using the Shannon entropy, then called the k-spatial entropy) and methods linked to this: SOOk, SelSOOk (see caGEO...
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