Search Results for "quality assurance"

Hosted at google code, for latest version please go to: https://code.google.com/p/ctqa-cp/ Automatic image quality analysis of computed tomography images of the CatPhan? phantom. CTQA is a software package to aid in quality assurance of image quality for CT scanners. The software currently only supports analysis of CT-images of the CatPhan600? phantom. Other phantoms may be supported upon request. The purpose of CTQA-cp is twofold: 1) To handle and analyze image sets consisting of a few thousand images that is commonly obtained from image quality assurance protocols on CT scanners. 2) Easily provide results that can be copied to your favorite word or spreadsheet processor, or be saved to disk.

...Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is written in Python3. 7.X is my rewrite in Java, but is still work in progress. Both are written to be as lightweight as possible so they can run with minimal memory-requirements on a desktop or laptop as well as on a compute cluster. ...

BushMan is a web interface and a quality assurance tool for biological sequence assembly. It is a small application that helps process chromatograms, and it assembles using Phred and Phrap. It produces a FASTA formatted consensus sequence.

The NHD Software Project is a collection of the utilities, scripts, APIs, standards, and application extensions used for the quality assurance of stream and river data, conflation/generalisation of hydrographic data, and other hydrologic data maintenance.