Search Results for "level set method"
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Showing 14 open source projects for "level set method"
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Qiskit
Qiskit is an open-source SDK for working with quantum computers
Qiskit [kiss-kit] is an open-source SDK for working with quantum computers at the level of pulses, circuits, and application modules. When you are looking to start Qiskit, you have two options. You can start Qiskit locally, which is much more secure and private, or you get started with Jupyter Notebooks hosted in IBM Quantum Lab. Qiskit includes a comprehensive set of quantum gates and a variety of pre-built circuits so users at all levels can use Qiskit for research and application development. ... -
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OpenQASM
Quantum assembly language for extended quantum circuits
...Quantum programs are described using the measurement-based quantum circuit model with support for classical feed-forward flow control based on measurement outcomes. OpenQASM presents a parameterized set of physical logic gates and concurrent real-time classical computations. Its main goal is to serve as an intermediate representation for higher-level compilers to communicate with quantum hardware. Allowances have been made for human usability. In particular, the language admits different representations of the same program as it is transformed from a high-level description to a pulse representation. -
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bidict
The bidirectional mapping library for Python
...Implemented in concise, well-factored, fully type-hinted Python code that is optimized for running efficiently as well as for long-term maintenance and stability. Extensively documented. 100% test coverage running continuously across all supported Python versions. Enterprise-level support for bidict can be obtained via the Tidelift subscription. One of the best things about bidict is that it touches a surprising number of interesting Python corners, especially given its small size and scope. Choose a tier and GitHub handles everything else. Your GitHub sponsorship will automatically go on the same bill you already have set up with GitHub, so after the one-click signup, there’s nothing else to do. -
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Snap7
32/64 bit multi-platform Ethernet S7 PLC communication suite
Snap7, through three specialized components: Client and the inedited Server and Partner, allows you to definitively integrate your PC based systems into a PLC automation chain. Designed to transfer large amounts of hi-speed data in industrial facilities, it scales easily, down to small Linux Arm boards such as Raspberry PI. Hi level object oriented wrappers are provided, currently C/C++, .NET/Mono, Pascal, LabVIEW, Python with many source code examples. Very easy to use, a full... -
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FractalRenderingApp
Lightweight app for visualization of Mandelbrot and Julia set
Source code is available on https://github.com/MarkoLeskovar/FractalRenderingApp -
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Virtual Laboratory Environment
A multi-modeling and simulation environment to study complex systems
VLE is a multi-modeling and simulation environment to study complex dynamic systems. VLE is based on the discrete event specification DEVS. and it implements the DSDE formalism (A merge of Dynamic Structure DEVS, DSDEVS, with Parallel DEVS, PDEVS). VLE provides a complete set of C++ libraries, called VFL (VLE Foundation Libraries), to develop DEVS models, to gets results of simulations, to launch simulation on cluster. The models can be developed with the DEVS formalism or with the classical... -
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GASiC
Genome Abundance Similarity Correction
One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods. ... -
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Sphere-Intersection 3D Shape Signature
local feature descriptor.
3D shape descriptor which explicitly captures the local geometry and encodes it using an efficient representation. Our method consists of multiple evolving fronts which are realized by a set of growing spheres on the surface. -
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We aim to develop a transformative computational method for automatic discovery of a set of dynamical rules that best captures both state transition and topological transformation in the data of spatio-temporal evolution of a complex network.
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CDSbank
multi-sequence extraction, filtering & formatting
...CDSbank also stores Genbank feature annotation, a flag to indicate incomplete 5’ and 3’ ends, full taxonomic data, and a heuristic to rank the scientific interest of a species. This rich information allows fully automated data set preparation with a level of sophistication that meets or exceeds manual processing. Defaults ensure ease of use for typical scenarios while allowing great flexibility when needed. Access is via a free web service at http://hazeslab.med.ualberta.ca/CDSbank/. SourceForge code can be used to build a local installation. -
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AMBIENT
Find active modules in metabolic networks using high-throughput data
...For example, scores for reactions based on transcriptional data of their annotated encoding genes can be used in the network and modules of coordinated expression changes can be found. This provides an alternative to pathway/gene set enrichment analyses which is simultaneously more flexible and more specific. -
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Tidal Analysis Program in PYthon (TAPPY) uses the least squares optimization function from scipy to perform a harmonic analysis (calculate amplitude and phases of a set of sine waves) of a hourly time series of water level values.
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A set of python programs for forward modelling of marine notch formation, along with an pseduo-inverse model for obtaining relative sea level curves from notch data.
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trimAl can consider several parameters, alone or in multiple combinations, in order to select the most-reliable positions in the alignment. These include the proportion of sequences with a gap, the level of residue similarity and, if several alignments for the same set of sequences are provided, the consistency level of columns among alignments. Moreover, trimAl allows to manually select a set of columns and sequences to be removed from the alignment. trimAl implements a series of automated algorithms that trim the alignment searching for optimum thresholds based on inherent characteristics of the input alignment, to be used so that the signal-to-noise ratio after alignment trimming phase is increased. ...
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