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Showing 13 open source projects for "h.264.t2"
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pyphoebusalarm
A Python package to create alarm configurations for EPICS Phoebus..
...This package has two intended usages: Converting Alarm Handler configurations to Phoebus and facilitating the creation of Phoebus alarm configs with Python scripts. Run `python convert_alh.py -h` to see about the scripts usage for converting alh to phoebus configs. See the alarmtree module's help/documentation on how to use it to build an alarm tree in Phyton and exporting it to Phoebus xml. -
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..."Modelling the geometry of textile reinforcements for composites: TexGen", Chapter 8 in "Composite reinforcements for optimum performance (Second Edition)", ed. P Boisse, Woodhead Publishing Ltd, 2021, ISBN: 978-0-12-819005-0. https://doi.org/10.1016/B978-0-12-819005-0.00008-3 Lin, H., Brown, L. P. & Long, A. C. 2011. Modelling and Simulating Textile Structures using TexGen. Advanced Materials Research, 331, 44-47. To reference version 3.13.0 please use: Louise Brown, mike-matveev, & georgespackman. (2023). louisepb/TexGen: TexGen v3.13.1 (v3.13.1). Zenodo. https://doi.org/10.5281/zenodo.8221491
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XRD CUBIC
Simulate crystal cell length (a), Miller indices {h, k, l}, d-spacing
This is a basic computer program (coded in Python) to simulate possible unit crystal cell length (a), Miller indices - {h, k, l} and interplanar spacing (d) for cubic crystals from observed (experimental) X-ray diffraction (XRD) angle, 2-theta. It can simulate all these possible crystal lattice parameters for cubic crystal systems between the given 2–theta values within the range of specified cell length (a) limits. 1. Enter wavelength of X-ray (in Angstroms) 2. -
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Celestial Precomputation
Sight Reduction for Air Navigation with Python
...All Revisions 8+ and the Windows release have been fixed. This Python TK application calculates a good set of stars for a 3 star fix, makes all calculations similar to the FAAs Celestial Computation Sheet (see FAA doc FAA-H-8083-18). Also, you can create a PDF file that generates Pub 249 Vol 1 for any epoch you specify. The PUB249 as PDF is found under "Files". I wrote this for my aircraft bubble octant :-) It is mainly useful for air navigation as it assumes a bubble sextant but may be used for normal sextants as well. Requires Ephem and ReportLab (optional for PDF output) Not to be used for real-world navigation! -
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Hénon map browser
Program for exploring the Hénon attractor
A Python program for exploring the Hénon attractor. For an explanation of what the Hénon attractor is please see Wikipedia (http://en.wikipedia.org/wiki/H%C3%A9non_map). With this program you can draw the Hénon attractor and interact with it in various ways. You can zoom in by selecting an area, vary the Henon parameters manually and even make animations with them. The functionality is demonstrated in a Youtube video. There is a help function included that explains in more detail how to use the program. -
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The Acids and Bases chapters' (14 and 15) calculations are arguably the hardest calculations in all of AP Chemistry. With some problems taking as long as ten minutes to solve, the can be hard to wrap the mind around. However, with the Acids and Bases Program, a quick answer is never more than a click away.
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ChIP-RNA-seqPRO
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
ChIP-RNA-seqPRO: A strategy for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing sites. Runnable python scripts packaged together with customized annotation libraries, demo data input and README guide. 9/26 : v1.1 Updated MAIN_IV to debug error thrown by python pandas no longer supporting 'subset'. This code will no longer be actively maintained/updated here. A cloud-based resource for comparative analysis of epigenetic,... -
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...Python implementation is more versatile (2D and 3D data). * a Leica file reader, * Steindhard bond orientational order calculation * a VTK file writer 1. Leocmach, M. & Tanaka, H. A novel particle tracking method with individual particle size measurement and its application to ordering in glassy hard sphere colloids. Soft Matter 9, 1447–1457 (2013). https://dx.doi.org/10.1039/C2SM27107A (http://arxiv.org/pdf/1301.7237.pdf)
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convert2orcazmatrix
Python script that converts regular zmatrix to orca-zmatrix format.
...I created a script that would convert the regular format to the special orca format. It is written in python and can be used like this. usage: convert2orcazmatrix.py [-h] -i INPUTFILE [-o OUTPUTFILE] -
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YEI 3-Space C API
A C API for interfacing with the YEI 3-Space family of IMUs.
The YEI 3-Space Sensor Application Programming Interface (API) is a series of functions, classes, and structure definitions designed to make writing applications that utilize the YEI 3-Space family of sensors fast and easy to support. The C/C++ variant of the API is built as a header (.h) and dynamic link library (.dll + .lib). With the C/C++ API, users that require easy integration of the 3-Space family of sensors into programming environments not natively supported may import the dynamic link library and call its contained functions from the importing program, as the API's function prototypes are all compiled as C prototypes and are name mangled as such. -
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MRI neonatal atlas app
Use this application to segment neonates mri brain scans
Thi application helps the segmentation of mri brain images into 6 tissue classes by using the T2 neonatal atlas available at http://www.brain-development.org. -
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H-mito is a mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree http://www.phylotree.org/. Ancillary scripts: mitoP.py to extract mutation lists and clustal-2-fasta.zip to join, align through clustalw and convert data.
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MIPGen
Simple Molecular Interaction Potential Generator in Python
Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome...
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