Showing 11 open source projects for "functional testing tool"

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  • 1
    Pytorch Points 3D

    Pytorch Points 3D

    Pytorch framework for doing deep learning on point clouds

    Torch Points 3D is a framework for developing and testing common deep learning models to solve tasks related to unstructured 3D spatial data i.e. Point Clouds. The framework currently integrates some of the best-published architectures and it integrates the most common public datasets for ease of reproducibility. It heavily relies on Pytorch Geometric and Facebook Hydra library thanks for the great work!
    Downloads: 1 This Week
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  • 2

    MToolBox

    A bioinformatics pipeline to analyze mtDNA from NGS data

    ...MToolBox includes an updated computational strategy to assemble mitochondrial genomes from Whole Exome and/or Genome Sequencing (PMID: 22669646) and an improved fragment-classify tool (PMID:22139932) for haplogroup assignment, functional and prioritization analysis of mitochondrial variants. MToolBox provides pathogenicity scores, profiles of genome variability and disease-associations for mitochondrial variants. MToolBox provides also a Variant Call Format file (version 4.0) featuring, for the first time, allele-specific heteroplasmy. ...
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    Downloads: 0 This Week
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  • 3
    Neural Networks Collection

    Neural Networks Collection

    Neural Networks Collection

    ...So far the project implements: LVQ in several variants, SOM in several variants, Hopfield network and Perceptron. Other neural network types are planned, but not implemented yet. The project can run in two modes: command line tool and Python 7.2 extension. Currently, Python version appears more functional, as it allows easy interaction with algorithms developed by other people.
    Downloads: 0 This Week
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  • 4

    PBTK Optimizer

    Application for optimization of parameters in PBTK models

    ...When it is impractical to use these methods to estimate a parameter, techniques can be used to optimize parameters so that model results best fit validation data. This tool was designed to optimize a user-specified list of parameters to a user-specified PBTK model. The user also controls validation data and optimization algorithms. In addition to optimized parameters, the tool outputs statistical information about the fit of the optimized model.
    Downloads: 0 This Week
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  • 5
    Nelder Plot Designer

    Nelder Plot Designer

    A Computer-aided Tool for Nelder Plot Design

    Nelder plot (Nelder 1962) is an experimental design for testing a multiple tree spacings in a single plot. The shape of plot is circular with some number of concentric wheels or arcs radiating outward and the spokes connecting the center. The intersections of spokes and arcs are the tree positions. The tree position on different wheels represent a different the tree spacing distance or tree density.
    Downloads: 0 This Week
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  • 6

    CorNetMap

    A tool for Gene Expression Correlation Network

    Capabilities of CorNetMap: 1. Read data as tab-delimited text file. Can be used for analysis of any data set beyond gene expression. 2. Capable of both two-dimensional and multidimensional data analysis. 3. Calculate Pearson correlation and cross-correlation for analysis data with phase difference. 4. Generate correlation Heat-map and draws network map. 5. Save correlation data as text file. How to use and doccumentation:...
    Downloads: 0 This Week
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  • 7

    pipasic

    pipasic: Protein Abundance Correction in Metaproteomic Data

    Metaproteomic analysis allows studying the interplay of organisms or functional groups and has become increasingly popular also for diagnostic purposes. However, difficulties arise due to the high sequence similarity between related organisms. Further, the state of conservation of proteins between species can be correlated with their expression level which can lead to significant bias in results and interpretation.
    Downloads: 0 This Week
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  • 8

    NetStress-NG

    NetStress is a DDoS and network stress testing tool.

    Syn Flood Attacks SYNFlood with static source port SYNFlood with random source port SYNFlood with static source ip address SYNFlood with random source address SynFlood with fragmented packets ACK Flood Attacks ACK Flood with static source port ACK Flood with random source port ACK Flood with static source ip address ACK Flood with random source address ACK Flood with fragmented packets FIN Flood Attacks FIN Flood with static source port FIN Flood with random source...
    Downloads: 3 This Week
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  • 9
    The RDXplorer is a computational tool for copy number variants (CNV) detection in whole human genome sequence data using read depth (RD) coverage. CNV detection is based on the Event-Wise Testing (EWT) algorithm recently published by our group.
    Downloads: 0 This Week
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  • 10
    Modelio-Open is a project hosting a set of open source extensions (SoaML, SysML and UML Testing Profile) for a previous version (1.2) of the Modelio Free tool . Currently, the lastest version (2.x) of Modelio modeling and generation tool is available at http://modelio.org/downloads/download-modelio.html. All extensions are downloadable at http://forge.modelio.org/projects.
    Downloads: 2 This Week
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  • 11
    PyMani is a program for robotic manipulator simulation. Designed for testing manipulator dynamics and as an educational tool for teaching the robotic parameters. This project currently uses Python, VPython, SymPy, PyODE, and wxPython.
    Downloads: 0 This Week
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