Showing 2 open source projects for "fastq"

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    caplib

    caplib

    Correct, translate and analyze combinatorial library sequencing data

    Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file.
    Downloads: 0 This Week
    Last Update:
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  • 2
    fastQ format data visual quality
    Simple python code that produces color-coded quality plots based on fastq format read quality scores. Scores are averaged over binned read tile coordinates. Useful for spotting spatial quality patterns.
    Downloads: 0 This Week
    Last Update:
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