Search Results for "atom-project"
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Showing 446 open source projects for "atom-project"
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Protenix
A trainable PyTorch reproduction of AlphaFold 3
...It supports both “full” models and lightweight variants such as “Protenix-Mini,” offering a trade-off between speed/compute cost and predictive accuracy — making structure prediction accessible even in resource-constrained environments. The project also includes support for constraints (e.g., specifying residue- or atom-level contact constraints, or pocket constraints) to guide predictions toward biologically or experimentally relevant conformations, which enhances its utility for tasks like modeling complexes, ligands, or antibody–antigen interactions. -
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qaqarot
Quantum Computer Library for Everyone
The Blueqat project has been renamed the Qaqarot Project because of the branding strategy of blueqat inc. -
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Seeker
Accurately Locate Smartphones using Social Engineering
...The project supports both manual deployment and tunneling services like Ngrok for external access. While primarily intended as an educational resource on security awareness, it highlights the risks of exposing geolocation data online. Its simplicity and effectiveness have made it a popular project in cybersecurity learning circles. -
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pyVideoTrans
Translate the video from one language to another and embed dubbing
pyVideoTrans is an ambitious open-source multimedia processing project that assembles speech recognition, subtitle generation, AI translation, voice synthesis, and video assembly into a unified pipeline for converting videos from one language to another with embedded dubbing and captions. At its core it runs speech-to-text models to transcribe audio tracks, translates the resulting text into a target language using local or cloud-based translation engines, synthesizes new speech to match the translated subtitles, and then merges that speech back into the video, creating a fully localized media file. ... -
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Qiskit
Qiskit is an open-source SDK for working with quantum computers
Qiskit [kiss-kit] is an open-source SDK for working with quantum computers at the level of pulses, circuits, and application modules. When you are looking to start Qiskit, you have two options. You can start Qiskit locally, which is much more secure and private, or you get started with Jupyter Notebooks hosted in IBM Quantum Lab. Qiskit includes a comprehensive set of quantum gates and a variety of pre-built circuits so users at all levels can use Qiskit for research and application... -
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SMILI
Scientific Visualisation Made Easy
The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with... -
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Amazon Braket Default Simulator
An implementation of a quantum simulator that you can run locally
...You can use the simulator to test quantum tasks that you construct for the Amazon Braket SDK before you submit them to the Amazon Braket service for execution. You must have the Amazon Braket SDK installed to use the local simulator. Follow the instructions in the README for setup. If you want to contribute to the project, be sure to run unit tests and get a successful result before you submit a pull request. The execution times for the performance tests are affected by the other processes running on the system. In order to get stable results, stop other applications when running these tests. -
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Grafana
Leading open-source visualization and observability platform
Grafana OSS is the leading open-source platform for visualization and observability. It enables teams to query, visualize, alert on, and explore telemetry data from multiple sources in a single interface. With support for 100+ data source plugins—including Prometheus, Loki, Elasticsearch, InfluxDB, SQL/NoSQL databases, and OpenTelemetry—Grafana helps teams correlate metrics, logs, and traces across applications and infrastructure. Users can build interactive dashboards with rich... -
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Claude Scientific Skills
A set of ready to use Agent Skills for research, science, engineering
Claude Scientific Skills is a large open source collection of ready-to-use scientific capabilities that extend AI coding agents into full research assistants. The project provides more than 170 curated skills covering domains such as genomics, drug discovery, medical imaging, physics, and advanced data analysis. Each skill bundles documentation, examples, and tool integrations so agents can reliably execute complex multi-step scientific workflows. The framework follows the open Agent Skills standard and works with multiple AI development environments including Claude Code, Cursor, and Codex. ... -
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bilingual_book_maker
Make bilingual epub books Using AI translate
...It is designed to process formats such as EPUB, TXT, SRT, and PDF, then generate translated output that helps readers compare the original text with the target language. The project supports multiple AI providers and models, including OpenAI-compatible models and other translation backends through LiteLLM-style integrations. It is especially useful for public domain books, language learning, subtitle translation, and personal reading workflows. Users can run it from Python scripts or install it as a command-line package for repeated translation tasks. ... -
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Astropy
Repository for the Astropy core package
The Astropy Project is a community effort to develop a common core package for Astronomy in Python and foster an ecosystem of interoperable astronomy packages. Astropy is a Python library for use in astronomy. Learn Astropy provides a portal to all of the Astropy educational material through a single dynamically searchable web page. It allows you to filter tutorials by keywords, search for filters, and make search queries in tutorials and documentation simultaneously. -
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Newton
An open-source, GPU-accelerated physics simulation engine
...Newton supports OpenUSD for modern 3D scene representation and interoperability, making it suitable for complex simulation ecosystems. It is developed as a Linux Foundation project with contributions from major organizations like NVIDIA, Google DeepMind, and Disney Research, highlighting its relevance in cutting-edge robotics and AI development. -
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Get Physics Done (GPD)
The first open-source agentic AI physicist
...The project focuses on reducing the friction involved in setting up experiments, running simulations, and analyzing results, allowing researchers to focus more on scientific insight rather than infrastructure. It emphasizes automation and reproducibility, ensuring that experiments can be easily replicated and extended by other researchers. -
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City Map Poster Generator
Transform your favorite cities into beautiful, minimalist designs
...The repository includes a library of predefined themes that change the overall look (for example, blueprint-like styling, warm neutrals, or high-contrast variants), making it easy to produce multiple aesthetic directions without rewriting code. It is structured as a reproducible Python project with a clear install story and an emphasis on “run it once and get a finished poster” ergonomics. The output is designed to be visually striking and consistent across cities, which is useful for gifting, decor, or generating a catalog of posters programmatically. -
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Cookiecutter Data Science
Project structure for doing and sharing data science work
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. When we think about data analysis, we often think just about the resulting reports, insights, or visualizations. While these end products are generally the main event, it's easy to focus on making the products look nice and ignore the quality of the code that generates them. Because these end products are created programmatically, code quality is still important! -
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Violin
Open-source Video Translation Skill
...It transcribes the original speech, translates the text, generates natural-sounding speech in the target language, and remuxes the new audio back into the video. The project is designed to keep the generated speech aligned with the original timing so the final result feels closer to a real dubbed video. It can be used from the command line, through a FastAPI web app, or as a Claude Code skill. Violin supports multilingual workflows and is useful for creators, educators, localization teams, and developers building automated video translation pipelines. ... -
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wttr.in
The right way to check the weather
wttr.in is a console-oriented weather forecast service that supports various information representation methods like terminal-oriented ANSI-sequences for console HTTP clients (curl, httpie, or wget), HTML for web browsers, or PNG for graphical viewers. Originally started as a small project, a wrapper for wego, intended to demonstrate the power of the console-oriented services, wttr.in became a popular weather reporting service, handling tens of millions of queries daily. -
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MathCode
A Frontier Mathematical Coding Agent
MathCode is a terminal-based AI coding assistant focused on mathematical formalization and theorem proving. It is designed to transform plain-language mathematical reasoning into verified Lean 4 code and formal proofs. The project combines AI agents with Lean Language Server Protocol integration, allowing it to inspect compiler feedback, search for lemmas, and iteratively repair failed proof attempts. It supports an agentic proving workflow where the system behaves more like an interactive mathematical engineer than a one-shot text generator. MathCode also includes visualization-oriented tooling such as theorem graph generation for Obsidian knowledge workflows. ... -
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Evo 2
Genome modeling and design across all domains of life
Evo 2 is a DNA language model system designed for long-context genome modeling and biological sequence design across all domains of life. The project models DNA at single-nucleotide resolution and supports context windows of up to one million base pairs, which places it in a class of models built for very large genomic reasoning tasks. According to the repository, it uses the StripedHyena 2 architecture, was pretrained with Savanna, and was trained autoregressively on the OpenGenome2 dataset containing 8.8 trillion tokens. ... -
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DAE Tools Project
Object-oriented equation-based modelling and optimisation software
DAE Tools is a cross-platform equation-based object-oriented modelling, simulation and optimisation software. It is not a modelling language nor a collection of numerical libraries but rather a higher level structure – an architectural design of interdependent software components providing an API for: - Model development/specification - Activities on developed models, such as simulation, optimisation, sensitivity analysis and parameter estimation - Processing of the results, such as... -
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Seamly2D
Free and open source pattern design software
Seamly2D enables the design, reuse, and remix of digital sewing patterns for creating bespoke-fit, specialty-sized, and ready-to-wear-sized clothing. Users have the right to utilize, sell, share, and distribute their patterns in any way they choose. * Downloads: https://seamly.io * Support: https://forum.seamly.io * Code: https://github.com/fashionfreedom/seamly2d * License: GPLv3+ -
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CBFLIB is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. The CBFLIB API is loosely based on the CIFPARSE API for mmCIF files.
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Free DELTA
Software tools for processing taxonomic descriptions in DELTA format
The Free DELTA Project is a free, open-source, software alternative for a generic system to the processing of taxonomic descriptions based on the DELTA (DEscription Language for TAxonomy) format. -
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Mantid Project (www.mantidproject.org)
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ANUGA is a software implementation of a hydrodynamic model which is specifically designed to model wetting and drying processes. ANUGA is a joint development project between Geoscience Australia (GA) and the Australian National University (ANU). ANUGA is now being developed on github at https://github.com/anuga-community/anuga_core For information on ANUGA please go to http://anuga.anu.edu.au The ANUGA project is described on http://en.wikipedia.org/wiki/ANUGA_Hydro
