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DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
PyPCB is a Python package for working with PCB (http://pcb.sourceforge.net) files.
PyPCB can be used to create new useful tools, as footprint generators or library managers.
This is a Python interface for reading and writing Magellan GPS unit map files. There is also a command line tool for creating GPS maps from OpenStreetMap data.
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The Model Interaction Environment for Neuroscience provides tools for development, searching, editing, execution, and visualization of biophysical models, abstract mathematical models, and experimental protocols used in neuroscience research.
LabVIEW tools for executing Python Scripts. Includes a Python Script Node and a suite of VIs for executing similar functionality. LabPython palette integrates into user.lib or other palette synch'ed location.
AGTK is a suite of software components for building tools for annotating linguistic signals,
time-series data which documents any kind of linguistic behavior (e.g. audio, video).
The internal data structures are based on annotation graphs.
pyLPCTools is a replacement for the Flash Programming Tools use with the Philips(tm)/NXP(tm) LPC2xxx series of ARM based microcontrollers. pyLPCTools is a script together with some ARM assembly language and a Python user interface. Please Donate !!
AppSignal's MCP server hands Claude, Cursor, or Zed your real errors, traces, and the deploy that shipped them. AI writes the fix; you review the diff.
This will be a place to release tools that have not yet been added to SciPy (or will not be added for whatever reason). Currently an interface to ImageMagick is here.
The LuSeismo project provides modules for the Earthworm project to capture analog seismometer data w/linux. The project also provides GUI interfaces used in the Loyola Physics Department for several labs, utilizing these seismometers as educational tools
GerbTool is a set of tools for modifying gerber and excellon drill files. GerbTool can be used to tile multiple gerber files as a single job, and can be run interactively or in batch mode.
SeqFreed is a bioinformatics desktop. It provides efficient access to sequence data and gene features, a customizable command line interface to locally installed bioinformatic tools and flexible display of either text or images in different page modes.
KU1K is a set of tools for 4D,5D and 6D compact U(1) lattice gauge theory Monte Carlo simulation using the Skipis-Vantzos algorithm. As the calculations involved, even for the 4D case, are consuming, the project is modular so as to run on the Grid.
yaucp, Yet another uController Project. Is a set of tools and source of code and information for developing for the AVR families of microcontrollers under Linux using only GPL-compatible tools, released under the GPL.
A collection of modules and enduser tools designed to help design, test and use system models. While my research (hence, the examples) is focused on hydro-ecological systems, the program can be used on any system characterized by ODEs (and soon PDEs?)
Disease Gene Profiler (DGP) comprises of a set of (bioinformatics) tools that can be used to identify the genes underlying susceptibility to common multifactorial diseases (such as diabetes, asthma and cancer) using freely available datasources.
This project provides one or more subset solutions for the UK National Health Service National Programme for IT. This project provides basic tools for the production and maintenance of SNOMED CT Clinical Terminology subsets.
openGPR is a framework for the management, processing and 2D/3D-visualization of ground penetrating radar (GPR, georadar) data. It interoperates with existing tools like Seismic Unix, with a special focus on georadar applications.
This project exists as a central meeting place for those wishing to share in-house developed applications and tools for local government (and related industries) in Australia.