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JSalesman is a very efficient Travelling Salesman problem solver that produces high-quality outputs. JSalesman uses hierarchial and multi-level approaches to solve the problem fast.
pypub is a Python library and application for downloading, storing, and analyzing biomedical literature MEDLINE records from PubMed (http://www.pubmed.com) in response to a user query.
A benchmarking utility providing administration of the benchmarking procedure and a web interface for public access on the results. The goal is to have an automated procedure after the benchmark specification.
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This software screens a given peak list against web based NMR databases (nmrshiftdb, HMDB...) and return possible molecules. It also take a given molecule to return expected peaks list.
aVolve is an evolutionary/genetic algorithm designed to evolve single-cell organisms in a micro ecosystem. It currently uses the JGAP Genetic algorithm, but does include a primitive genetic algorithm written in Python.
GUIDE (GUgyeol Integrated Decipherment Environment) is a set of tools for browsing historical document images, transcribing, deciphering and translating it. Developed for studying old buddhist codices, it would be serviceable for studying any papyri.
this is a small project which provides several mathematical function useful for a chemist or somebody working with mass specs.
The goal is to provide several cuda and c based functions which can be easily accessed using java, groovy and python.
Simple Python class for managing tables of data in memory using NumPy. It allows to give names to views of array. The package contains few classes built on top of the basic one to be used as post processing tools for particle optics computations.
nBoost is a suite of boosting algorithms designed to solve binary classification problems on data that is not linearly separable by a convex combination of base hypotheses, i.e. noisy data. WARNING: Active development. Underlying algorithm is unstable.
It is a Cross Language Interface Platform that allows different languages to call and execute functions of other languages using xml-rpc as the remote procedure call vehicle.
FaceIn! is a face recognizing log in application for Linux.
You will never have to enter your password anymore! Just show your face to your camera and let the system recognize you and take you to your desktop!
CC8Works is a Web-based software system for managing and documenting a cross of eight existing inbred mouse lines to yield hundreds to thousands of recombinant inbred lines that will become a permanent genetic resource for biomedical research.
Maximal Clique Motif Reduction (MCMR) is a software program for running and then combining the output of multiple motif finder programs, such as MEME, AlignACE and Weeder, into a set of consensus predictions with associated confidence rankings.
Ducking is a software who is providing simulation of probable docking between two proteins using rigid body monte carlo method. It is written in python and uses the libraries wxPython, VTK, SciPy and BioPython.
hemcuveGUI is a graphical interface for HEMCUVE++ (see http://tsc.unex.es/~llandesa/page17/page17.html).
More specifically, hemcuveGUI lets you
· to collect all the data required by HEMCUVE++,
· to manage a materials database,
· to call the external executable HEMCUVE++ and
· to visualize its results.
Weather-fetching software for Symbian S60 cell phones which shows the current weather and weather forecast at the 'Standby' screen. Multi-language, skinnable interface, different weather info sources and other adjustments.
Software package for stochastic and hybrid simulation of microtubule dynamics and the effects of anti-mitotic drugs and microtubule regulatory proteins.
SuperG is a code library written in Python intended to quickly enable programmers in a scientific environment to manage data files created by dispersed scientific instrumentation.
SpikeyTree infers divergence times between populations that share a common
history described by a tree. SpikeyTree assumes that the populations have
been evolving under isolation, according to the Wright-Fisher with pure drift.
SpikeyTree can use the Beta or the Beta with Spikes approximation to the allele
frequency distribution under the Wright-Fisher.
More details can be found in
Tataru et al. Inference under a Wright-Fisher model using an accurate beta approximation
If using...
PyAero is a toolkit developped at andheo for CFD software :
post-processing, curve generation, …
Currently PyAero focuses on ONERA's code "Cedre".
PyAero is powered by Qt, Python, PySide, enthought and pyLot.