ArrayOligoSelector (AOS) systematically designs gene specific long oligo probes for entire genomes. The program optimizes the oligo selections for several parameters, including uniqueness in the genome, internal repeats, self-binding, and GC content.
The main goal of this project is to create a system-independent MathML rendering engine in Python. This engine works with an abstract 'plotter' driver class, that can be subclassed for any rendering device needed.
A data display and analysis toolkit that will provide radio astronomers with a versatile mechanism for viewing and interpreting their observation data.
As of 2012, the source code is hosted in GitHub https://github.com/tessonec/PySPG
PySPG is both, a set of python modules and a program that allows the user to run a program systematically changing the parameters that them receive.
Originally conceived to generate parameters for running simulations in computational physics.
Written in C++, IFI-picloader is a US First Competition Linux port for Innovation First Inc. Robot Controller programmer using a pic 18F8520. It writes MCC18 compiled hex files to PIC and allows users to program under *nix based operating systems.
GnuPinch is a pinch analysis and supertargeting tool. GnuPinch can calculate heat exchanger networks (HEN) with minimum energy requeriments and minimum cost. It also can calculate other parameters of the pinch analysis of a chemical process.
The X-Ray Data Processing package enables ad hoc wrangling of data from x-ray experiments. A collection of software based on this library is also available.
File-Spector is a small, fast and easy to use binary file analyzer and Inspector.
It allows the users to format a complete binary file structure and then use it to read any binary file that matches the specified format.
BLIX is a cross-platform set of Python extension modules and Python scripts for Blender (www.blender.org). These scripts add camera calibration, 3D reconstruction and rigid body orientation to Blender.
Viewmol is a graphical front end for computational chemistry programs. It is able to graphically aid in the generation of molecular structures for computations and to visualize their results.
A Java software for 3D visualization of graphs/networks. It implements many graph layout algorithms (such as force-directed methods), graph generators (such as scale-free networks) and graph modifiers. Most functions can be accessed through its GUI.
STASS stands for Sound Treatment, Analysis and Synthesis Software. It will provide ingeneers and searchers easy-to-use as well as performant tools for sound analysis (spectro, sona and so on), treatment (filters, noise-gate) and synthesis (scepstrum).
DesktopTools is a collection of small utillities which help to make your daily life easier. Since the tools themself are rather small (projectwise) I keep them not as individual projects, but have them under this collective name.
The MP4Free project provides a simulation, analysis and exploration platform for multi-processor system-on-chip applications at variable level of abstraction, providing also a comprehensive component library.
TORCH is a web enabled electronic health record (EHR) application. TORCH is usable in single practitioner offices and scalable up to multi-site practices.
Dowser is a research tool for the web. It clusters results from search engines, associates words that appear in previous searches, and keeps a local cache of all the results you click on in a searchable database. It helps you keep track of what you find.
...Amplicon is written in Python 2.3 and Tkinter 8.4. The current script was created for Windows and an executable is available. Future versions of the script should be able to run on Linux and Mac