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SMMP (Simple Molecular Mechanics for Proteins) is a program library for protein simulations with an emphasis on advanced Monte Carlo algorithms. It includes various force fields to calculate the energy of a protein and protein-protein interactions.
rmachine is a register machine simulator (the complexity theory version), programmed in python, complete with a module to be used in your programs and a (PyQt4) GUI.
PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.
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swiginac is a Python interface to the GiNaC (GiNaC is not a CAS) C++ library, built with SWIG. The aim of swiginac is to make all the functionality of GiNaC accessible from Python.
A command line based weather reporting tool written in python. View current weather conditions, extended day forecasts, and station id lookups as reported from weather.com. Customize output via weathergetrc configuration file. Platform independent.
AppSignal's MCP server hands Claude, Cursor, or Zed your real errors, traces, and the deploy that shipped them. AI writes the fix; you review the diff.
Mapnik is an OpenSource C++/Python toolkit for developing GIS (Geographic Information Systems) applications. At the core is a C++ shared library providing algorithms/patterns for spatial data access and visualization.
A language and a compiler for the solution of differential equations (ODE). Both lumped and distributed variables (PDE) will be possible. The ability to solve DAEs is a long term goal. The compiler generates a Python program that does the computation.
Feedisto is your personal newspaper. Your newspaper is collocted from rss feeds, parsed by a bayesian filter to rate its relevance and served as a static html page or on a webserver to train the filter. Writing plugins is very easy.
HeWIT helps you create and fill out forms. It tells you if you've missed anything or made any mistakes. You can then send the form over email, upload to a web site, or pass it by memory stick to whoever needs it next.
A software toolkit that implements the CoSy Architecture Schema for developing integrated intelligent robotic systems. The toolkit focuses on supporting on a space of information-processing architectures based on shared working memories.
Open Metaheuristic (oMetah) is a library aimed at the conception and the rigourous testing of metaheuristics (i.e. genetic algorithms, simulated annealing, ...). The code design is separated in components : algorithms, problems and a test report generator
FlexGrePPS forms the foundation of a novel antigenic screening
methodology that is based on the representation of an entire proteome
by near-optimal degenerate peptide pools.
Differential-algebraic simulator in python. Process and control systems are modelled w/ bloc diagrams. It allows algebraic loops, has an automatic steady-state computation, detects singular systems, and uses variable time-step transient integration.
This is a Python program based on the NegEx algorithm that detects the polarity of the clinical evidence in clinical random trials.
If you use this code please cite this paper:
P. Davis-Desmond and Diego Mollá. Detection of Evidence in Clinical Research Papers (2012). Australasian Workshop On Health Informatics and Knowledge Management (HIKM 2012), Melbourne, Australia.
http://www.ics.mq.edu.au/~diego/publications/hikm12.pdf
Programa para simular un ocular reticulado mediante una webcam. Permite utilizar una cámara web compatible con v4l2 para hacer alineación polar de una montura ecuatorial con el método de deriva (drift method)
WARNING! HPGL source code (NOT the releases, they are still here) now moved to the GitHub at https://github.com/hpgl/hpgl. Please, update your bookmarks!
L.E.I.C.A. (Long Exposure Internet CAmera) is an application that takes input from your webcam, or v4l2 device, and makes a long-exposure image.
Until now there's only a python binding for this app, soon there will be a C/C++ SDL one
imbatcher is an image batcher and rfl Registax Frame List creator that use an Mean Square Difference algorithm to separate images from the same set automatically .