Search Results for "java class analysis" - Page 7
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Showing 342 open source projects for "java class analysis"
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GEPETTO - Gene Prioritization in Java
GEPETTO (GEne Prioritization ExTended TOol)
GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein... -
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IMPORTANT: The project moved over to github! You can find it at: https://github.com/exhuma/python-cluster
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BRAHMS is a Modular Execution Framework for dynamical systems. It knits together independently-authored software modules implementing dynamical processes into an integrated system, and supervises the deployment and execution of that system.
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Provide a reference implementation of Moving Taylor Bayesian Regression, a method for nonparametric multi-dimensional function estimation with correlated errors from finite samples, as a Python package based on SciPy
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GIIAF Microscopy Library
The GIIAF Microscopy Library, that uses customised OMERO software
This project incorporates a suite of tools that aim to allow researchers within Griffith's Imaging and Image Analysis Facility (GIIAF) to efficiently and effectively provide secure, centralised, web-accessible data storage, management and manipulation. The open-source Java-based OMERO software was customised to provide most of the features of this project. -
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A C++ library for the computation of bifurcation diagrams: it provides tools for the integration of systems of ODEs that depend on parameters. A Python interface is included.
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A web-based interface for the Hadoop MapReduce framework that simplifies the process of writing and running MapReduce jobs. Aimed at introducing parallelism concepts in introductory computer science courses.
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GUANO
GUANO - Graphical User interface for performing ANalysis Of variance
Free and open source standalone program capable of conducting between, within, and mixed analyses of variance (ANOVA). Provides a simple graphical user interface for specifying analyses and interaction plots (analyses performed by http://code.google.com/p/pyvttbl/). Features: - Capable of high order factorial designs (> 2 factors) - Within and mixed analyses of variance provide corrections for violations of sphericity (Huynh-Feldt, Greenhouse-Geisser, Box) - A variety of data... -
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Plotmeister is a data exploration tool. It parses your ASCII data and generates a simple (text-based) table format. You can modify this table and eventually create nice looking figures.
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openBmap
a free and open map of wireless communicating objects
openBmap collects data and provides open maps and statistics of all communicating objects: cellular antennas, wifi hotspots. All softwares from back-end to client are open-source under AGPL v3 license. -
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Arachne
Exploration of a Hierarchical+Functional Approach To Data Organization
This is dedicated to development of a small class for organizing data in both a traditional parent<->child hierarchy and by the functions used to generate child data nodes from parent data. The core of the project is in the class definitions contained within arachne.py, a demonstration of how this method of arranging data can be used to solve a relatively interesting problem may be found in test.py -
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minder
Monitoring your infrastructure for free.
This software presents a flexible and configurable proposal for monitoring and management of real and virtual HPC infrastructures, compatible with paradigm of cloud computing. We help you to answer: 1) What is the performance of my resources? 2) What equipment and resources do we have already? 3) What do we need to upgrade or repair? 4) What can we consolidate to reduce complexity or reduce energy use? 5) What resources would be better reused somewhere else? Status: PreAlpha, so... -
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ProSym
Software package that facilitates traffic simulation
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JBoost is a simple, robust system for classification. JBoost contains implementations of several boosting algorithms in an alternating decision tree framework. In addition, JBoost provides extensible software for adding more learning algorithms.
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BikeVE
A tool for estimating CdA and Crr from Garmin .tcx files.
A tool for estimating CdA and Crr from Garmin .tcx files. -
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QUASR
Cross-platform NGS processing and analysis pipeline in Python
QUASR is a lightweight pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is... -
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Injection Wizard is an application for injecting traffic into WEP protected Wi-Fi networks, like aireplay-ng, but it's much more easy to use and it can work with worse conditions.
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niftilib
** MAIN SITE IS NOW: https://github.com/NIFTI-Imaging/nifti_clib **
niftilib is a collection of i/o routines for the nifti1 neuroimage data format. C (nifticlib), Java (niftijlib), Matlab (niftimatlib), and Python (pynifti) code is available. For nifti format info see: http://nifti.nimh.nih.gov/ -
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Feedisto is your personal newspaper. Your newspaper is collocted from rss feeds, parsed by a bayesian filter to rate its relevance and served as a static html page or on a webserver to train the filter. Writing plugins is very easy.
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A software toolkit that implements the CoSy Architecture Schema for developing integrated intelligent robotic systems. The toolkit focuses on supporting on a space of information-processing architectures based on shared working memories.
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Plantlore is a botanical occurence database being written in Java. It also has a BIOCASE Provider software based web interface.
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A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file...
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Pink is an image processing library developed at ESIEE Engineering for research and teaching purposes. It contains implementations of over 200 algorithms for image segmentation and filtering.
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This project aims to be a easy-to-use toolkit of algorithms and utilities for semantic data mining. So far all algorithms are implemented as web services and we provide widgets for their use in the Orange4WS data mining platform.
