Search Results for "python 3" - Page 6
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Showing 542 open source projects for "python 3"
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Grafana: The open and composable observability platformGrafana is the open source analytics & monitoring solution for every database.
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autodiff
Python class for automatic differentiation
Python automatic differentiation class for forward mode automatic differentiation using operator overloading and reimplemented math functions. Single and partial derivatives are supported. Supported operators: +, -, *, /, **, +=, -=, *=, /=, **= Available functions: sin, cos, tan, asin, acos, atan, sqrt, exp, log, log10, sinh, cosh, tanh, asinh, acosh, atanh See README file for usage examples. -
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Squere is a prokaryote genome annotation user-friendly software, with easy installer and graphical interface.
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ExSTraCS
Extended Supervised Tracking and Classifying System
...ExSTraCS combines a number of recent advancements into a single algorithmic platform. It can flexibly handle (1) discrete or continuous attributes, (2) missing data, (3) balanced or imbalanced datasets, and (4) binary or many classes. A complete users guide for ExSTraCS is included. Coded in Python 2.7. -
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Mathpad
A Python based command line math utility.
Mathpad is a command line utility. It will later have a GUI, but not at this time. -
Keep company data safe with Chrome EnterpriseMake AI work your way with Chrome Enterprise. Block unapproved sites and set custom data controls that align with your company's policies.
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Graphical tool for managing database of geocaches and waypoints, importing GPX files and exporting geocaches to many formats including GPX, POI, HTML and others.
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ipcvis
Visualize Inter Process Communication
Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian... -
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StochPy - Stochastistic modeling in Python - is an easy-to-use package, which provides several stochastic simulation algorithms and unique analysis techniques, which can be used for stochastic simulations of biochemical systems.
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pure python polyfit
python2/3: compute polyfit (1D, 2D, N-D) without thirdparty libraries
python2/3: compute polyfit (1D, 2D, N-D) without any thirdparty library like numpy, scipy etc. also can be used for least squares solution computation and for A=QR matrix decomposition. Tested with python 2.7 and 3.4 Consider donating to this project: https://sourceforge.net/p/purepythonpolyfit/donation For a Sample use, refer to the WIKI -
Free and Open Source HR SoftwareGive your HR team the tools they need to streamline administrative tasks, support employees, and make informed decisions with the OrangeHRM free and open source HR software.
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Astrophotography Lab
A collection of useful tools for astrophotographers
Astrophotography Lab (APLab) is a free program intended for anyone interested in astrophotography. It has two main purposes: - Interpreting data extracted from your astrophotos to produce useful information. - Using this information as a help for further improving your imaging results. The program consists of four main tools: an analyser tool, a calculator tool, a simulator tool and a plotting tool. The tools are connected, allowing you to transfer information between them, and easily... -
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QG fantasy maps plugins
Some pythons plugins to enhance fantasy maps creation with QGis
QGis permit the use of python script to handle maps. Here are some python code ready to use and modify, and some associated samples. -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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irit_diff_sequences
Python tool to create lifespan sequences from Wikipedia edits history
A Python tool which produced lifespan sequences from edits history. The tool is first developed for the Wikipedia edits history but can easily be adapted for others applications. From a database containing for each article its list of revisions, produce one csv file per article containing authored sequences and lifespans. Output format: i,j,lifespan,author with - i : begining of the chars sequence - j : end of the chars sequence - lifespan : number of edits the sequence has survives... -
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KEMP
A FDTD solver for electromagnetic wave simulations on a GPU cluster
KEMP is a fast FDTD solver on a GPU-based cluster. The FDTD (Finite-Difference Time-Domain) method is a popular numerical method for electromagnetic field simulations. KEMP enables hardware accelerations suitable for multi-GPU, multi-core CPU and GPU cluster. KEMP also provide easy configuration by using Python scripting language. -
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wmtsa-python
Discrete wavelet methods for time series analysis using python
Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python and... -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting... -
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psignifit is a toolbox to fit psychometric functions and test hypotheses on psychometric data. This is version 3 which will now predominantly support python.
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UniPyRange
Tool to fetch protein/DNA truncation constructs from Uniprot DB
.... - Requires BioPython (3) and Bioservices Package (4) (1) The UniProt Consortium UniProt: a hub for protein information Nucleic Acids Res. 43: D204-D212 (2015). (2) RefSeq: an update on mammalian reference sequences. Nucleic Acids Res. 2014 Jan 1;42(1):D756-63. (3) Cock PJ et al. Bioinformatics (2009) (4) Cokelaer et al, Bioinformatics (2013) -
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openSEQ
NGS compute distro proloaded with pipeline analysis software
...Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk -
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Malware Analysis Network in Taiwan
MAN in Taiwan, MiT
Malware Analysis Network in Taiwan <Man in Taiwan, MiT> Welcome to contact us (TonTon@TWMAN.ORG) if you are interested in collaborating with us. This project is open source and distributed under the GNU General Public License version 3. Please feel free to add to or modify this source and propose changes or new converters. Developer & Copyrighted by : TonTon Hsien-De Huang Prompter: Jazz Yao-Tsung Wang, Figaro Chen-Ho Yang | Logo Desinger:Temaki Guo Community on... -
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FingerID
Metabolite identification via machine learning.
[NOTICE!] FingerID since version 1.4 will be hosted on github: https://github.com/icdishb/fingerid A metabolite identification software using tandem mass spectrometry and kernel methods. The related paper can be found at http://bioinformatics.oxfordjournals.org/content/early/2012/07/18/bioinformatics.bts437.abstract. Now it supports unix/linux like system. -
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graphene-like-ribbons
Calculate electronic properties of graphene-like nanoribbons
User friendly interface for calculating electronic properties in graphene-like ribbons. The programs uses the tight binding approximation and mean field Hubbard model to predict electronic properties of graphene-like nanoribbons. See Discussion to ask questions or details Update: New versions of this program will be known as quantum-honeycomp -
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MapFramer
Create cartographic map frames from an XML template
mapframer is a commandline program that reads a map frame specification from an XML-file and outputs a map frame to a PDF-file. -
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C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
