Showing 2072 open source projects for "linux-secure"

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  • 1

    GromacsProSuite

    Graphical User Interface for Gromacs

    This tool is an integrated graphical interface that simplifies molecular dynamics simulations using Gromacs. It provides a structured, tab-based environment to set up, execute, and analyze simulations data without complex command-line operations. The software automates tasks such as topology generation, solvation, ion addition, minimization, equilibration, and production runs while executing GROMACS commands in the background. Built-in monitoring tracks CPU, RAM, and disk usage to ensure...
    Downloads: 9 This Week
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  • 2
    relax

    relax

    Molecular dynamics by NMR data analysis

    The software package 'relax' is designed for the study of molecular dynamics through the analysis of experimental NMR data. Organic molecules, proteins, RNA, DNA, sugars, and other biomolecules are all supported. It supports exponential curve fitting for the calculation of the R1 and R2 relaxation rates, calculation of the NOE, reduced spectral density mapping, the Lipari and Szabo model-free analysis, study of domain motions via the N-state model and frame order dynamics theories using...
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    Downloads: 6 This Week
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  • 3
    Airborne Data Processing and Analysis

    Airborne Data Processing and Analysis

    Software to processing and analyze of airborne measurements.

    The Airborne Data Processing and Analysis (ADPAA) package is an open-source software package containing a collection of programs and scripts to process and analyze data from in-situ instruments deployed on airborne platforms. The ADPAA package was started to process data on the North Dakota Citation Research Aircraft but has been used to process data on many airborne platforms. The software methodology used in ADPAA is provided in the peer-review publication: Delene, D. J., Airborne Data...
    Downloads: 5 This Week
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  • 4
    IP-XACT 2009/2014  Platform

    IP-XACT 2009/2014 Platform

    Smart GUI/Commandline tools to create IP-XACT( 2009/2014) files

    Smart GUI to create or update IP-XACT often needed for the IP packaging. It has capability create Bus Definitions from scratch to populate BusDef library. One can create IP-XACT Component, Design or Registers by importing Ip in System Verilog/Verilog-95/VHDL, instantiate Bus Interfaces with proper port maps and attributes as needed. Smart GUI to create IP-XACT Registers, Memory Maps, Address Blocks for IP- has feature to import XLS or Verilog . It has Tcl/Python API...
    Downloads: 5 This Week
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  • 5
    Digraph3

    Digraph3

    A collection of python3 modules for Algorithmic Decision Theory

    This collection of Python3 modules provides a large range of implemented decision aiding algorithms useful in the field of outranking digraphs based Multiple Criteria Decision Aid (MCDA), especially best choice, linear ranking and absolute or relative rating algorithms with multiple incommensurable criteria. Technical documentation and tutorials are available under the following link: https://digraph3.readthedocs.io/en/latest/ The tutorials introduce the main objects like digraphs,...
    Downloads: 5 This Week
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  • 6
    minfx

    minfx

    Minfx optimisation library

    The minfx project is a Python package for numerical optimisation, being a large collection of standard minimisation algorithms. The name minfx is simply a shortening of the mathematical expression min f(x).
    Downloads: 3 This Week
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  • 7
    Abacus software

    Abacus software

    Software to control and analyze Tausand Abacus coincidence devices

    Abacus Software is a specialized tool for controlling and analyzing Tausand Abacus devices (AB1002, AB1004, AB1502, AB1504, AB2502, and AB2504). It enables precise measurement of temporal coincidences with up to 2-nanosecond resolution, and real-time visualization of count data from one, two, or three channels simultaneously. The software includes advanced features such as adjustable line width, sampling time configuration, direct device settings control, and the ability to save both raw...
    Downloads: 4 This Week
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  • 8

    ERmod

    Approximate solvation free energy calculator

    ERmod (Energy Representation Module) is a program to calculate the solvation free energy based on the energy representation method (J. Chem. Phys. 113, 6070 (2000)). The program allows users to calculate the solvation free energy to arbitrary solvents, including inhomogeneous systems, and can run in cooperation with state-of-art molecular simulation software, such as LAMMPS, GROMACS and/or AMBER.
    Downloads: 3 This Week
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  • 9
    NZMATH

    NZMATH

    Python Calculator on Number Theory, three-birds-one learning material

    NZMATH is a Python calculator on number theory. It is freely available and distributed under the BSD license. All programs are written only by Python so that you can easily see their algorithmic number theory. You can get NZMATH with a single command: % python -m pip install -U nzmath Here % is the command line prompt of Windows or Unix/macOS. This release contains several program corrections and additions obtained by writing a programming "notebook" of the book 'Lectures on...
    Downloads: 4 This Week
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  • 10
    Computational electromagnetics software. Uses surface Method of Moments, enhanced by using the Multilevel Fast Multipole Method. Code is parallelized and runs on laptops, desktops and clusters. The code precision is adjustable, it is fast and uses little memory. CFIE is used for closed surfaces, and EFIE for open PEC surfaces. Can function on GMSH, GiD and ANSYS meshes.
    Downloads: 3 This Week
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  • 11
    MCPower

    MCPower

    MCPower — simple Monte Carlo power analysis for complex models

    MCPower-GUI is a desktop application that provides a graphical interface for the MCPower Monte Carlo power analysis library. It guides users through the full workflow across three tabs: Model setup (formula input with live parsing, CSV data upload with auto-detected variable types, effect size sliders, and correlation editing), Analysis configuration (find power for a given sample size or find the minimum sample size for a target power, with multiple testing correction and scenario...
    Downloads: 3 This Week
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  • 12
    ASALI

    ASALI

    ASALI is an open-source code for chemical engineers

    Do you work with chemical reactors? Are you curious about them? ASALI is the open-source code that you are looking for. Chemical reactor models, transport/thermodynamic properties of gases, equilibrium calculations. ASALI couples all these features with an user friendly graphical interface. Modeling chemical reactors has never been so easy.
    Downloads: 3 This Week
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  • 13

    Chemical Trajectory Analyzer

    A software package for processing and analyzing chemical trajectories

    ChemTraYzer creates reaction models from molecular dynamics simulations. It's available as open software (MIT license). Please find a full description @ https://www.ltt.rwth-aachen.de/cms/LTT/Forschung/Forschung-am-LTT/Model-Based-Fuel-Design/Aktuelle-Projekte/~kqbf/ChemTraYzer/lidx/1 M.Döntgen, M.-D.Przybylski-Freund, L.C.Kröger, W.A.Kopp, A.E.Ismail, K.Leonhard, "Automated Discovery of Reaction Pathways, Rate Constants, and Transition States Using Reactive Molecular Dynamics...
    Downloads: 3 This Week
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  • 14
    STRIKER-GUI

    STRIKER-GUI

    Refine the spectral library to enhance its completeness and coverage.

    STRIKER is a tool for correcting spectra with missing or incorrect adduct annotations. It also enables efficient construction of an HMDB-based spectral library and extraction of sublibraries from large spectral libraries.
    Downloads: 2 This Week
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  • 15
    CAMPARI

    CAMPARI

    Software for molecular simulations and trajectory analysis

    We are proud to introduce version 5 of CAMPARI. We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and...
    Downloads: 4 This Week
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  • 16
    Tellurium

    Tellurium

    Model, simulate, and analyze biochemical systems using one tool.

    Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support.
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    Downloads: 2 This Week
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  • 17

    phexecute

    Please see details at latest guide: PH_software_User_Guide&programming

    Downloads: 1 This Week
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  • 18
    PhiPsi

    PhiPsi

    An eXtended Finite Element Method (XFEM) Software.

    PhiPsi is a 2D and 3D computational solid mechanics program, which involves the extended finite element method (XFEM), as well as the finite element method (FEM). PhiPsi is written in Fortran and compiled using the GNU Fortran compiler (gfortran). PPView is a visualization tool for PhiPsi. PPView can be used to import Abaqus inp file, view the model defined in the PhiPsi keywords file (*.kpp), edit PhiPsi keywords file, perform a PhiPsi simulation, and view the simulation result files...
    Downloads: 4 This Week
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  • 19
    CircuiTikZ Generator

    CircuiTikZ Generator

    This software is a tool for designing electronic circuits using LaTeX.

    This software is a tool for designing electronic circuits using LaTeX. With an intuitive graphical interface, you can create complex circuits quickly and easily, while the LaTeX code generator translates your designs into code compatible with the LaTeX circuitikz library.
    Downloads: 2 This Week
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  • 20
    Graphical Forecast Editor

    Graphical Forecast Editor

    View and edit grids of meteorological values

    Allows viewing and editing of weather data from weather models as two dimensional grids. Python scripting support hooks in the ingest, editing and product creation subsystems allow for customization. All network communication made through HTTP services. Enhanced version of the system used by national weather services.
    Downloads: 2 This Week
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  • 21
    preMath

    preMath

    Basic Maths for pre-school

    It a basic Maths program to help children to count.
    Downloads: 1 This Week
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  • 22

    emid

    emid is a Python program for voice emotion identification experiments.

    emid is a Python program for voice emotion identification experiments. Further info can be found on the project webpage: https://samcarcagno.altervista.org/emid/emid.html
    Downloads: 1 This Week
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  • 23

    sound_source_id

    sound_source_id is a Python program for sound localization experiments

    sound_source_id is a Python program for sound localization experiments. Further info can be found on the project webpage: https://samcarcagno.altervista.org/sound_source_id/sound_source_id.html
    Downloads: 1 This Week
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  • 24
    Tucunaré
    Distribuição GNU/Linux brasileira, originalmente para telecentros de projetos de inclusão digital, mas que agora conta com instalação para desktop comum. Distro baseada no Debian GNU/Linux. Foi desenvolvida, primeiramente, para facilitar a instalação e configuração do sistema operacional nos telecentros de projetos de inclusão digital. Conta com programas amigáveis, que são adaptados com com as necessidades de uso, no dia a dia em telecentros ou não.
    Downloads: 1 This Week
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  • 25
    SimPET

    SimPET

    A web platform for the MC simulation of realistic brain PET data

    SimPET (http://www.sim-pet.org) is an open, efficient, and user‐friendly online platform for the generation of synthetic brain PET datasets. The platform offers the ability to generate realistic activity and attenuation maps from patient's PET/CT and MRI images. These maps can then be simulated, and sinograms and simulated images can be downloaded. More advanced features can be obtained by using the SimPET...
    Downloads: 2 This Week
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