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FONZIE is a bioinformatic tool written in Python developed for the genetic cartography speciality. FONZIE allow as well to find markers on a set of sequences than to find associate oligonucleotides. http://www.biomedcentral.com/1756-0500/3/322/abstra
Methods and testing of methods for automatic analysis of in situ cyclic
voltammetry data.
This, at least initially, is the code from my masters thesis, which was
done as a contribution to a larger project called Aevum. Aevum is being
developed at t
The intention is to (eventually) create a simple hydrology / hydraulics package that will calculate stormwater or wastewater flows in a drainage network. At the moment, it consists of a couple of libraries and calculators. Hope it's useful.
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This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
This project hosts tools used for analysis of Gaussian Mixture Distributions (GMDs) which are used for statistical signal processing. The tools are libraries for implementing GMD operations and programs used to analyze properties of GMDs.
The Dragon Fire compiler takes a new, 21st century, look at the Dragon (i.e. Dragon Book). No longer impenetrable to the programmer, this compiler is open and available to them. You control the Dragon, and get Dragon insight into your programs.
Worst Cases is a python script that enables calculations on worst case objects. Like a calculator operating on worst cases (e.g. [1,2,3]) rather than on real numbers (2.35) WARNING: This program is released as is, and has never been extensively teste
URDB is a universal reversible debugger that adds reversibility to almost any debugger through a python-based wrapper. It also supports reversible debugging of distributed computations, and temporal search on expression values.
Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
PyTuneSounds is a application that lets the user tune the volumes of sounds in a variety of ways, e.g. to use these in psychoacoustic experiments. It is possible to correct the spectrum of the sound with respect to equipment-inherent filters.
LaserFoam performs simulations of laser pulses using an adaptive split step Fourier method to solve the generalized nonlinear Schrödinger equation. It provides a graphical environment to run and visualize the results.
pyFoam is a Python front-end to the OpenFOAM (Open Source CFD Toolbox). It introduces interactivity into OpenFOAM, simplifies connection with third-party functionality and streamlines design of custom user solvers
DTMF detector library and/or application that reads in the specified audio file and returns/outputs whether DTMF detected and/or list of detected digits. May have GUI and command line interfaces.
ESML is an interchange technology that utilizes external metadata to allow applications to plug and play seamlessly with Earth Science specific datasets in heterogeneous formats.
ContBeam is a program capable of solving structural configurations of continuous beams on multiple supports. it handles conditions and load combinations provide being output characteristics of the stress and deformation of the structure