Search Results for "antix-linux" - Page 48

Protein ALignment Optimiser (PALO) is a script for the selection and alignment of the best combination of transcripts among orthologous genes. PALO is mainly written in Python, although other programming languages are also implemented (R, Perl...).

The PooDLE IIR Experiment System Framework (PIIRExS) is a web application that enables, organizes, synchronizes and simplifies the design and conduction of task-based experiments for researchers with an interest in interactive user studies.

The SIMP/STEP platform provides a fast, efficient, portable abstract framework for interactive and scripted cellular automata and lattice gas computing in the Python environment. SIMP provides a high-level 'programmable matter' laboratory built on

Gaphor is a UML modeling environment written in Python. Gaphor is small and very extensible. The repository is located at http://github.com/gaphor/gaphor.

QGis Python Plugin to create named map themes to switch the visibility of all layers belonging to theme. Experimental working prototype with functionality to include in future version of QGIS.

Cute Thermowell is now part of LibreEngineering suite: http://sourceforge.net/projects/libreeng/

ScardFace is a python3k library for interfacing with smart cards, which supports Plug-and-Play readers inclusion and threading. It also offers classes for manipulating APDU cmds and resps, and use them in a transport-protocol-independent fashion.

Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome...

A simple and still alpha Python script to extract features out of an OpenStreetMap (OSM) file into basic Keyhole markup language (KML)

pydaqtools provides a common interface to data-acquisition hardware for Python. Control analog/digital output or acquire analog/digital input for immediate analysis with Python for scientific, educational or engineering applications.

PyAnnotation is a Python Library to access and manipulate linguistically annotated corpus files. Supported file formats are Kura XML, Elan XML and Toolbox files. A Corpus Reader API is provided to support statistical analysis within the NLTK.

Project moved to https://codelv.com/projects/inkcut/ Code move to https://github.com/codelv/inkcut/ Forum moved to https://inkcut.org/

This project is a complete cross-platform (Windows, Linux) framework for Evolutionary Computation in pure python. See the project site at http://pyevolve.sourceforge.net or the blog at http://pyevolve.sourceforge.net/wordpress

BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.

ppvector: Parallel Processing Vector This program is used to calculate, in parallel, by python module multiprocessing, points in vector

A genetic algorithm in Python for evolving programs that write a given string to an allocated dataspace, using a made-up machine language with only 7 instructions and flow reversal.

A set of python programs for forward modelling of marine notch formation, along with an pseduo-inverse model for obtaining relative sea level curves from notch data.

Charybdis is a Python-driven set of applications for solving partial differential equations on irregular domains.

Sempy is a Python package for the solution of partial differential equations using the spectral element method.

Electronic Components Database, is a customizable database for electronic components thought for electronic hobbyist.

H-mito is a mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree http://www.phylotree.org/. Ancillary scripts: mitoP.py to extract mutation lists and clustal-2-fasta.zip to join, align through clustalw and convert data.

KAF2Tiger2 is a KAF (KYOTO annotation format) to <tiger2/> (Tiger2 XML) converter.

OOP simulation package of mechanical pulp and paper mill

not public yet. will be released when its done.

ByoDyn (http://cbbl.imim.es/ByoDyn) is a software tool for the study of biochemical networks within the framework of systems biology. SBML compatible, ByoDyn is a group effort of the Computational Biochemistry and Biophysics Lab.