Search Results for "Open Source Discovery Open Source & DevTools" - Page 48

The SIMP/STEP platform provides a fast, efficient, portable abstract framework for interactive and scripted cellular automata and lattice gas computing in the Python environment. SIMP provides a high-level 'programmable matter' laboratory built on

A simple and still alpha Python script to extract features out of an OpenStreetMap (OSM) file into basic Keyhole markup language (KML)

GUI program to perform multiple searches on proteins for specific groups of amino acids in specific protein regions and to be able to filter by signalp scores. I hope to add lots of new functionality including the ability to create local database

QGis Python Plugin to create named map themes to switch the visibility of all layers belonging to theme. Experimental working prototype with functionality to include in future version of QGIS.

Cute Thermowell is now part of LibreEngineering suite: http://sourceforge.net/projects/libreeng/

This project is a complete cross-platform (Windows, Linux) framework for Evolutionary Computation in pure python. See the project site at http://pyevolve.sourceforge.net or the blog at http://pyevolve.sourceforge.net/wordpress

Gaphor is a UML modeling environment written in Python. Gaphor is small and very extensible. The repository is located at http://github.com/gaphor/gaphor.

Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome...

PyAnnotation is a Python Library to access and manipulate linguistically annotated corpus files. Supported file formats are Kura XML, Elan XML and Toolbox files. A Corpus Reader API is provided to support statistical analysis within the NLTK.

BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.

ppvector: Parallel Processing Vector This program is used to calculate, in parallel, by python module multiprocessing, points in vector

ScardFace is a python3k library for interfacing with smart cards, which supports Plug-and-Play readers inclusion and threading. It also offers classes for manipulating APDU cmds and resps, and use them in a transport-protocol-independent fashion.

Project moved to https://codelv.com/projects/inkcut/ Code move to https://github.com/codelv/inkcut/ Forum moved to https://inkcut.org/

pydaqtools provides a common interface to data-acquisition hardware for Python. Control analog/digital output or acquire analog/digital input for immediate analysis with Python for scientific, educational or engineering applications.

A genetic algorithm in Python for evolving programs that write a given string to an allocated dataspace, using a made-up machine language with only 7 instructions and flow reversal.

fqms is a software tool for Lable-free Quantification of Proteins by LCMSE.

A set of python programs for forward modelling of marine notch formation, along with an pseduo-inverse model for obtaining relative sea level curves from notch data.

Charybdis is a Python-driven set of applications for solving partial differential equations on irregular domains.

Sempy is a Python package for the solution of partial differential equations using the spectral element method.

Electronic Components Database, is a customizable database for electronic components thought for electronic hobbyist.

H-mito is a mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree http://www.phylotree.org/. Ancillary scripts: mitoP.py to extract mutation lists and clustal-2-fasta.zip to join, align through clustalw and convert data.

Non-stealth keylogger for Windows. Records mouse and keyboard (precision~10-15ms), log of events (disk size~2.5k/s) + log of operations (~ 0.2k/s). Standalone, with local copy of Python: unzip to install, delete to uninstall.NEW: hidden/visible icon

KAF2Tiger2 is a KAF (KYOTO annotation format) to <tiger2/> (Tiger2 XML) converter.

Wizard-like software to run experimental procedures (at large). Each step of the procedure is a file (document, on-line form, checklist, video, program... ). Experimental data and documents are backuped together. NEW: templates of procedures

This project examines techniques to model three-dimensional rigid body motion using the geometric algebra of Dual Quaternions and how such models compare to more traditional models when used in underconstrained filtering applications.