Search Results for "python source" - Page 44
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Showing 2171 open source projects for "python source"
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Noisy Channel Simulator
Demonstrate errors in transmission of a file over a noisy channel.
This program was written to dimonstrate errors in transmission for a presentation on Claude Shannon's Noisy Channel Coding Theorem. It takes an input file, the probability of a bit being flipped, and, if specified, the size of the header of the file. The program was intended to take monochrome bitmap files as input, so that each bit refers to a pixel in the image and thus, it would be easy to see errors in the output file, as some of the pixels would be flipped; however, it will work on any... -
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WEST (Wind Energy Simulation Toolkit) is a wind simulation application. It can be use to obtain high resolution results at various altitudes.
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NeMo is a high-performance spiking neural network simulator which simulates networks of Izhikevich neurons on CUDA-enabled GPUs. NeMo is a C++ class library, with additional interfaces for pure C, Python, and Matlab.
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GWCNV is a genome-wide algorithm for detecting CNV associations with diseases. It works directly on a transformation of intensity data. It is powerful and sensitive in detecting small CNV associations, and retains high power for large CNVs.
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Forecast Production Assistant
Met object database and interactive graphical editor
Meteorologists use the FPA to create a series of weather charts, known as depictions, that show weather fields over a sequence of times. The weather fields can contain grid point data or sets of areas, lines or scattered points. The weather depictions are not just graphical displays, but windows into an object database. By connecting processes to the database, forecast offices can automatically generate forecast products or run local models, while spending more of their time on weather... -
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A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file...
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MRI neonatal atlas app
Use this application to segment neonates mri brain scans
Thi application helps the segmentation of mri brain images into 6 tissue classes by using the T2 neonatal atlas available at http://www.brain-development.org. -
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Platform for parallel computation in the Amazon cloud, including machine learning ensembles written in R for computational biology and other areas of scientific research. Home to MR-Tandem, a hadoop-enabled fork of X!Tandem peptide search engine.
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We here present a novel computer algorithm, called AutoClickChem, capable of performing many click-chemistry reactions in silico. In silico modeling of click-chemistry products may prove useful in rational drug design and drug optimization.
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rp6simul
rp6simul is a simulator for the RP6 robot (AREXX Engineering)
The rp6simul project brings simulation software for the RP6 robot that is manufactured by AREXX engineering. Besides support for all peripherals on the robot base, the simulator also fully supports the m32 extension module, and both can be simulated either independently or simultaneously. Furthermore, a simple 2d environment can easily be created to test lighting, collision, motor speeds and so on. The simulator does not run native AVR files, but instead a thin wrapper is provided so that... -
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mltc
Minimum Lens Thickness Calculation
mltc - Minimum Lens Thickness Calculation. Application is created for minimum lens thickness calculation according to GOST (Russian, Belarusian) Standard -
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xyz2eps
python command line utility to print xyz-geometry to eps file format.
xyz2eps.py is an command line utility written in Python programing language which prints the geometry from xyz-file directly to the eps-file format. Originally it was designed to study the problems related to grain boundaries in graphene. -
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Febrl (Freely Extensible Biomedical Record Linkage) does data standardisation (segmentation and cleaning) and probabilistic record linkage ("fuzzy" matching) of one or more files or data sources which do not share a unique record key or identifier.
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MRI Atlas Application
MRI Brain atlas application
Application to use MRI brain atlases composed of template images and label images pairs. This application will segment MRI images using labels provided by the atlas. The labels are combined using the voting fusion technique. Please visit our page at http://www.brain-development.org. -
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Geo-Spatial Data Viewer (GSDView) is a lightweight viewer for geo-spatial data and products. It is written in python and Qt4 and uses the GDAL library. GSDView is modular and has a simple plug-in architecture.
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Tidal Analysis Program in PYthon (TAPPY) uses the least squares optimization function from scipy to perform a harmonic analysis (calculate amplitude and phases of a set of sine waves) of a hourly time series of water level values.
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This project consists of two python based parts, ParaPost and TurboVTK, in order to post process Turbomachinery CFD results with ParaView and VTK.
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Amalthea is a collection of scripts (mainly Python, glued with Bash scripts) for *nix systems that helps to simultaneously collect information from multiple laboratory balances oriented to gravimetric measurement of plant transpiration.
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PyBact is an open source software written in Python for Bacterial Identification. The software generates simulated data matrix which accurately represents the probabilistic positive/negative results of the tested biochemical test.
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This project aims to be a easy-to-use toolkit of algorithms and utilities for semantic data mining. So far all algorithms are implemented as web services and we provide widgets for their use in the Orange4WS data mining platform.
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Differential-algebraic simulator in python. Process and control systems are modelled w/ bloc diagrams. It allows algebraic loops, has an automatic steady-state computation, detects singular systems, and uses variable time-step transient integration.
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Graph-based Extraction and Summarization - a generic graph-based summarization framework. Basic functionality is provided - third-party modules can be plugged in.
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Clinical Evidence Detector
Detector of clinical evidence
This is a Python program based on the NegEx algorithm that detects the polarity of the clinical evidence in clinical random trials. If you use this code please cite this paper: P. Davis-Desmond and Diego Mollá. Detection of Evidence in Clinical Research Papers (2012). Australasian Workshop On Health Informatics and Knowledge Management (HIKM 2012), Melbourne, Australia. http://www.ics.mq.edu.au/~diego/publications/hikm12.pdf -
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A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file.
