Showing 1848 open source projects for "x-windows"

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  • 1
    Quantum Chemistry Import Tool is a django application that parses the output file of quantum chemistry software as NWChem, Octopus, Gaussian, etc. The result can be saved in relational database.
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  • 2
    This program calculates the resistance on pin "-" an OpAmp put infeedback resistance (Rf) and gain (|Av|)
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  • 3
    We aim to develop a transformative computational method for automatic discovery of a set of dynamical rules that best captures both state transition and topological transformation in the data of spatio-temporal evolution of a complex network.
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  • 4

    biomasfor

    GIS GRASS extension to assess the exploitability of forest biomass

    A GIS GRASS extension to assess the exploitability of forest biomass residues take in to account different (ground and cable) harvesting techniques.
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  • 5
    Event based simulator that allow to yield from nested function. Implemented using greenlet and standard thread python library.
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  • 6
    dna-barcode

    dna-barcode

    Find and analyze barcodes in DNA sequence files

    Find and analyze barcodes in DNA sequence files
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  • 7
    BODE: Bioinformatics ODds and Ends
    A collection of bioinformatics-related software created by members of Cancer Research UK (possibly among others).
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  • 8

    Language Constructor

    Complete tool for constructing/manipulating languages in digital form

    With this tool you can easily design a new language, digitize an existing one or incrementally reconstruct an ancient language. It allows for free experimentation of all aspects of the language, so it does not have to be made consistent on paper first. You can edit script, syntax, grammar, morphology, lexicon and phonology, as well as write documents in the language, as it might be too complex to be handled by current font technology. The information is stored in xml format for easy...
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  • 9

    PyGAO

    Genetic Algorithm Optimization for Python

    A simple interface for performing genetic algorithm optimization for numerical problems. I am starting with a stripped-down version, where a solution can be described using a single vector of float numbers. Eventually, I will expand to more generic data structures and add multiple-species search options. For the time being, I have no plans of developing a GUI. For now, this is strictly a computational module. In addition to the standard Python libraries, PyGAO uses numpy.
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  • 10
    Ellipt2d is a finite element program for solving second order, real and complex, two-dimensional elliptic problems with user-defined operators. Because Ellipt2d is written in Python, the code can easily be adapted for specific problems.
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  • 11

    Experiment manager

    Computer science experiment manager

    experimaestro is an experiment manager, and is composed of (1) a job scheduler that handles dependencies and locking (2) a modular experiment description framework, that allows easy description of the various parts of an experiments.
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  • 12

    Genomic Binding Sites Analyser (BiSA)

    Genomic Region Archiving and Binding Sites Analysis (BiSA)

    BiSA is a bioinformatics database resource that allows investigators to run a number of overlapping genomic region analyses using their own datasets, or against the pre-loaded Knowledge Base. Analysis results can be restricted to a chromosome; the minimum base pair overlap in two sets or maximum distance between regions can be set; as can the maximum allowed distance between region centres. BiSA is capable of reporting overlapping regions that share common base pairs; regions that are...
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  • 13

    Chi Square Calculator

    An unlimited calculator for Chi Squared

    This Chi Squared Calculator allows the user to enter any number of rows and columns, enter the observed frequencies used in the calculation, and the program will output the answer, as well as the degrees of freedom. This program runs on Python 3.2 ## BUT NO LONGER REQUIRES PYTHON to run! (Now in .exe form!) ## Sorry for the lack of floating point (Decimal) numbers support; attempting to input decimals will crash the program. Will fix soon! If you need any help, information, my email...
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  • 14
    Autonomous Robot Simulator

    Autonomous Robot Simulator

    Physically-accurate robotics simulator written in Python

    ARS is a physically-accurate robotics simulator written in Python. It's main purpose is to help researchers with to develop mobile manipulators and, in general, any multi-body system. It is open-source, modular, easy to learn and use, and can be a valuable tool in the process of robot design, in the development of control and reasoning algorithms, as well as in teaching and educational activities.
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  • 15
    LinuxCNC
    LinuxCNC controls CNC machines. It can drive milling machines, lathes, 3d printers, laser cutters, plasma cutters, robot arms, hexapods, and more.
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  • 16

    Genetic data converter

    Convert genetic data for hapmixmap software

    Genetic data converter, for hapmap.org and hapmixmap data formats. Reads data in tabular format and writes in hapmixmap format. It's possible to add extensions to output different data formats.
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  • 17
    Easy Equations

    Easy Equations

    Hand Written Equation Creator

    ...The focus of this utility is to provide user friendly access to write mathematical equations which is helpful for students, lecturers, mathematicians and Research persons who prefer using mathematical equations in a document, PowerPoint or web sites. Works on Windows as well as Linux platforms. Software Requirements: JDK 7 or higher. Linux Platform with kernel version 2.7 or higher.(for Linux users).python necessary only in linux environment to use COPY functionality.python is pre installed in recent linux distributions.
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  • 18

    PyDQP

    Distributed QP Solver in Python

    PyDQP implementes 11 different dual decomposition schemes, both first and second order, in order to solve quadratic programs in a distributed fashion.
    Downloads: 0 This Week
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  • 19

    pyespeak

    Python to eSpeak speech synthesis

    ctypes Python module for eSpeak http://espeak.sf.net speech synthesis
    Downloads: 0 This Week
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  • 20

    X-Freq

    X-Ray Reflectivity Frequency Analysis

    Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques.
    Downloads: 0 This Week
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  • 21
    A functional-structural model of tree growth based on carbon partitioning among individual organs that compete for resources.
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  • 22
    iTree: scalable multithreaded phylogenomic pipeline
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  • 23
    EASER

    EASER

    Ensembl Easy Sequence Retriever

    Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335.
    Downloads: 0 This Week
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  • 24

    Dosematic3

    Software for aberration dosymetry

    Objective: The program is being developed for three main purposes: A. Dose assessment after acute whole body exposure. B. Dose assessment in partial body exposure C. Dose assessment after protracted and fractioned exposure 2. Applicability The following DNA lesions can be investigated with the help of the program: A. Dicentrics B. γ-H2AX foci C. Micronuclei D. PCC fragments It is planned to include Comet assays as well RICA assays in the future.
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  • 25

    SunlightDPD

    Open source codes related to dissipative particle dynamics

    SunlightDPD provides a home for open source codes related to the dissipative particle dynamics (DPD) simulation method. Currently the file release contains the HNC integral equation code.
    Downloads: 0 This Week
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