Showing 96 open source projects for "ofn-scripts"

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  • 1

    t2t-pipe

    automatic alignment pipeline for parallel treebanks

    The *Tree-to-Tree (t2t) Alignment Pipe* is a collection of python scripts, co-ordinating the process of automatic alignment of parallel treebanks from plain text files with a single call from a unix command line. Supported Languages: DE, FR, EN
    Downloads: 0 This Week
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  • 2

    Physic Research Tools

    Python, Physics, PyQt, Software, Data adquisition, Spectroscopy, UV

    ...Podrán ver que parte de los programas están mas documentados que otros tratare de ir poniéndome al día comentando el código y escribiendo la documentación de los distintos scripts.
    Downloads: 0 This Week
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  • 3

    PolyCTLDesigner

    Python scripts for designing polyepitope T-cell immunogens

    Given the peptides (T-cell epitopes) PolyCTLDesigner selects flanking sequences to optimize TAP-binding and joins resulting oligopeptides into a polyepitope in a way providing efficient liberation of potential epitopes by proteasomal and/or immunoproteasomal processing and minimizing the number of junctional epitopes. For constructing polyepitopes PolyCTLDesigner utilizes known amino acid patterns of proteasome cleavage and TAP-binding specificity. PolyCTLDesigner is also able to choose...
    Downloads: 0 This Week
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  • 4
    ParaSim

    ParaSim

    Parallelized calculation of molecular similarities

    Diversity assessments and comparisons of large compound databases require calculating similarities of millions of compounds in an affordable time. ParaSim addresses this challenge by parallelizing the calculations according to the number of computing cores available on a single machine. It is optimized for the throughput of very large numbers of query structures against very large numbers of reference structures. As as special feature, ParaSim allows to store and and to access frequently...
    Downloads: 0 This Week
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  • 5

    galaxyPhotometrySimulator

    Set of scripts to perform galaxy photometry simulations.

    This project contains a set of python scripts to perform SExtractor galaxy photometry simulations. It uses Galfit to simulate the galaxies and SExtractor for the photometry. It is defined to be used also with distributed computing and with Condor. No very well documented yet. Developed for my PhD.
    Downloads: 0 This Week
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  • 6
    slumo

    slumo

    Software and Library for USB2AD device

    ...The first is stand alone measurement software with GUI using GTK3+ and python 3. The second is a library that handle all comunication with device, so you can create your own scripts for custom measuring in a very easy way.
    Downloads: 0 This Week
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  • 7

    ReferenceFree

    Scripts for reference free genomic analysis

    These are Python scripts plus C/C++ programs for automating the reference free genomic analysis described in: Kua C-S, Ruan J, Harting J, Ye C-X, Helmus MR, et al. (2012) Reference-Free Comparative Genomics of 174 Chloroplasts. PLoS One 7(11). http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0048995 Analytical concept conceived by CHCannon and CSKua.
    Downloads: 0 This Week
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  • 8

    Dvipdfm tool for SCons

    SCons tool to cooperate with dvipdfm program

    SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This is a SCons extension (tool) which enables usage of the dvipdfm program to convert dvi files to pdf.
    Downloads: 0 This Week
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  • 9

    u/sbmv2012

    Taxonomy assignment of metazoans using a python based pipeline

    The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database.
    Downloads: 0 This Week
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  • Lightspeed golf course management software Icon
    Lightspeed golf course management software

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  • 10
    CAD Scripts project is designed to automate the work of CAD Softwares. Here you will find scripts/softwares which help to do tasks easily. E.g- Specify coordinates of figures in input file and get output dxf file without actually drawing anything.
    Downloads: 1 This Week
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  • 11
    MappingSW

    MappingSW

    Small python scripts to enjoy mapping

    This project has born to set a place where you can find simple scripts in python to be used for mapping activities.
    Downloads: 0 This Week
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  • 12
    Amalthea is a collection of scripts (mainly Python, glued with Bash scripts) for *nix systems that helps to simultaneously collect information from multiple laboratory balances oriented to gravimetric measurement of plant transpiration.
    Downloads: 0 This Week
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  • 13
    icetools provides a development environment for numerical ice flow models/simulations. Nonlinear rheology and Stokes approach are implemented. "Ready to use" programs/scripts are available based on different numerical libraries, from educational to HPC
    Downloads: 0 This Week
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  • 14
    This is a set of scripts that helps with processing of NMR pH titration data. These scripts allow for fitting (using R) and plotting of data of multiple residues. The program needs to be made more user friendly.
    Downloads: 0 This Week
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  • 15
    Liegkat-Archiv delivers ALK converters for spatial data formats (EDBS, BGRUND, SQD, DFK, HK) and coordinate systems used in German cadastral agencies before ALKIS into KML and JML. It delivers Python packages and XSL files.
    Downloads: 0 This Week
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  • 16
    H-mito is a mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree http://www.phylotree.org/. Ancillary scripts: mitoP.py to extract mutation lists and clustal-2-fasta.zip to join, align through clustalw and convert data.
    Downloads: 0 This Week
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  • 17
    Scripts and tools for OpenStreetMap (osm) Sample maps can be found at : <http://www.leretourdelautruche.com/map/index.html>
    Downloads: 0 This Week
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  • 18
    Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
    Downloads: 0 This Week
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  • 19
    Fasta<>Multifasta
    These scripts written in Python allow you to convert fasta files into multifasta file and vice versa.
    Downloads: 0 This Week
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  • 20
    A cross-platform library that computes fast and accurate SIFT image features. libsiftfast provides Octave/Matlab scripts, a command line interface, and a python interface (siftfastpy). Optimized with SIMD instructions and OpenMP .
    Downloads: 0 This Week
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  • 21
    Use of USB to Serial and USB to Parallel BUS CONVERTERS available from ElectronicBRICKS at http://electronicbricks.blogspot.com/search/label/usb-Brick.
    Downloads: 0 This Week
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  • 22
    Set of python scripts that can be used for the calculations of equilibrium fractionation factors from experiments and from statistical mechanics theory. python scripts use Scipy/Numpy/Matplotlib/WxPython for calculations, plotting and the GUI
    Downloads: 0 This Week
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  • 23
    P2TK, the Penn Phonetics Toolkit, developed in the University of Pennsylvania Linguistics Department Phonetics Lab, is a collection of Python scripts and other tools to aid speech research.
    Downloads: 0 This Week
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  • 24
    ASR-Builder provides an easy-to-use interface to the HTK toolkit, that allows users to build ASR systems. ASR-Builder provides a platform that performs house-keeping tasks when using HTK and also provides default training/testing/recognition scripts.
    Downloads: 1 This Week
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  • 25
    Python scripts to convert Matlab code to Octave and back.
    Downloads: 0 This Week
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