Showing 478 open source projects for "line"

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  • 1
    Truss-101

    Truss-101

    A desktop application written in Python to solve 2D truss structures.

    A desktop application to solve statically determinate and indeterminate 2D truss structures using Matrix Displacement Method (aka Finite Element Method).
    Downloads: 15 This Week
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  • 2
    MiModD

    MiModD

    Mutation Identification in Model Organism Genomes using Desktop PCs

    MiModD is a software package for genomic variant identification from next-generation sequencing (NGS) data with optimized usage of system resources and a user-friendly interface. For most model organism genomes it lets the user carry out a complete analysis from unaligned genomic NGS read data to an annotated list of variants on a regular Desktop PC within a few hours. Its user-interface is beginner-friendly and designed to encourage geneticists to analyze NGS data themselves without the...
    Downloads: 0 This Week
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  • 3
    Argos Translate

    Argos Translate

    Open-source offline translation library written in Python

    Argos Translate uses OpenNMT for translations and can be used as either a Python library, command-line, or GUI application. Argos Translate supports installing language model packages which are zip archives with a ".argosmodel" extension containing the data needed for translation. LibreTranslate is an API and web-app built on top of Argos Translate. Argos Translate also manages automatically pivoting through intermediate languages to translate between languages that don't have a direct translation between them installed. ...
    Downloads: 163 This Week
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  • 4

    MITRE Annotation Toolkit

    A toolkit for managing and manipulating text annotations

    ...Annotation is a process, used mostly by researchers in natural language processing, of enhancing documents with information about the various phrase types the documents contain. MAT supports both UI interaction and command-line interaction, and provides various levels of control over the overall annotation process. It can be customized for specific tasks (e.g., named entity identification, de-identification of medical records). The goal of MAT is not to help you configure your training engine (in the default case, the Carafe CRF system) to achieve the best possible performance on your data. ...
    Downloads: 0 This Week
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  • 5
    Downloads: 0 This Week
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  • 6
    U-Net Fusion RFI

    U-Net Fusion RFI

    U-Net for RFI Detection based on @jakeret's implementation

    See original code here: https://github.com/jakeret/tf_unet Currently this project is based on Tensorflow 1.13 code base and there are no plans to transfer to TF version 2. The primary improvements to this code base include a training and evaluation framework, along with a fusion based approach to detection, combining a number of models (currently hard coded to two trained models) along with Sum Threshold as an additional "expert." Additional work is being done to add custom layers to...
    Downloads: 0 This Week
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  • 7
    Software, information, data sets and documentation for the Web as Corpus community.
    Downloads: 1 This Week
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  • 8
    APTOS is an open source Apt translator project. It consists of several CAM applications, based on the Apt programming language. It is used to create control programs for cnc mills, lathes, water jets, lasers, and other industrial equipment.
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    Downloads: 6 This Week
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  • 9

    ccplot

    CloudSat and CALIPSO plotting tool

    ccplot is an open source command-line program for plotting profile, layer and earth view data sets from CloudSat, CALIPSO and Aqua MODIS products.
    Downloads: 1 This Week
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  • 10
    ...Motu handles, extracts and transforms oceanographic huge volumes of data without performance collapse. This client enables to extract and download data through a python command line Indesol project sample: http://www.indeso.web.id/indeso_wp/index.php/faq/30-6-how-to-write-and-run-the-script-to-download-indeso-met-ocean-data
    Downloads: 1 This Week
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  • 11
    Neural Networks Collection

    Neural Networks Collection

    Neural Networks Collection

    ...So far the project implements: LVQ in several variants, SOM in several variants, Hopfield network and Perceptron. Other neural network types are planned, but not implemented yet. The project can run in two modes: command line tool and Python 7.2 extension. Currently, Python version appears more functional, as it allows easy interaction with algorithms developed by other people.
    Downloads: 0 This Week
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  • 12
    medical image analysis

    medical image analysis

    Libraries and command line tools for medical image processing.

    This software provides libraries and command line tools for the processing and analysis of gray scale medical images.
    Downloads: 3 This Week
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  • 13
    SUM Calculator

    SUM Calculator

    Portable bundle for Windows

    This is a PORTABLE app bundle for WINDOWS. No installation required! (Uncompressed size is about 60Mb because of required libraries for all Windows versions from XP to 10. The application is incomparably small.) Unzip, run sumcalc.exe. That's it! You can put the folder wherever you want, except system folders with permissions (e.g. Program Files), and create a shortcut if needed. Cross-platform source and...
    Downloads: 3 This Week
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  • 14
    PythonToolkit (PTK)
    PythonToolkit (PTK) is an interactive environment for python. It was designed to provide a python based environment similiar to Matlab for scientists and engineers however it can also be used as a general purpose interactive python environment.
    Downloads: 1 This Week
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  • 15
    AICtools

    AICtools

    Workflow and set of tools for Automated Imagery Classification

    AICtools is a GIS workflow and set of tools to facilitate Automated Imagery Classification (AIC) and analysis of surface features over time. Allows bulk processing of large data sets, including automated metadata processing/filtering, compressed archive extraction and file manipulation, raster band compositing, pre-processing, mosaicking, clipping. Automates a subset of operations involved in classification of satellite imagery and the associated raster calculations used for time trend analysis.
    Downloads: 0 This Week
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  • 16

    Microarray assosiated motif analyzer

    Cis-element prediction tool from microarray data

    We developed a novel clustering-free method, microarray-associated motif analyzer (MAMA), to predict novel cis-acting elements based on weighted sequence similarities and gene expression profiles in microarray analyses. Simulation of gene expression was performed using a support vector machine and based on the presence of predicted motifs and motif pairs. The accuracy of simulated gene expression was used to evaluate the quality of prediction and to optimize the parameters used in this...
    Downloads: 0 This Week
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  • 17

    Spectral Python

    A python module for hyperspectral image processing

    Spectral Python (SPy) is a python package for reading, viewing, manipulating, and classifying hyperspectral image (HSI) data. SPy includes functions for clustering, dimensionality reduction, supervised classification, and more.
    Downloads: 0 This Week
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  • 18

    ICDtools

    Tools for ICD (International Classification of Diseases) data

    Currently implemented: Python parser to import ICD10 XML data into a relational PostgreSQL database Sponsored by Ordium Biotechnology https://ordium.ai MIT License
    Downloads: 0 This Week
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  • 19
    TCellXTalk

    TCellXTalk

    TCellXTalk Web-App from LP CSIC/UAB

    TCellXTalk is a comprehensive database of experimentally detected phosphorylation, ubiquitination and acetylation sites in human T cells. The web-app at www.TCellXTalk.org makes TCellXTalk accessible from Internet, and enables the in silico prediction of potential co-modified peptides to facilitate their experimental detection, using targeted or directed mass spectrometry, for the study of protein post-translational modification cross-talk. More detailed information on TCellXTalk and...
    Downloads: 0 This Week
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  • 20
    HyLiTE

    HyLiTE

    Hybrid Lineage Transcriptome Explorer

    HyLiTE (Hybrid Lineage Transcriptome Explorer) analyzes high-throughput transcriptome data from allopolyploid species. Allopolyploidy describes the formation of a new hybrid organism from the union of two or more different parents. Allopolyploid species carry multiple copies of each gene (homeologs), which often exhibit unusual expression patterns. Homeolog expression levels can technically be determined from next generation sequencing data (RNA-seq), but in practice, assigning reads to...
    Downloads: 0 This Week
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  • 21
    LymPHOS2

    LymPHOS2

    LymPHOS2 Web-App

    LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes...
    Downloads: 0 This Week
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  • 22

    calculate-curie

    Calculates Curie temperature for honeycomb/hexagonal materials

    Program to calculate Curie temperatures for hexagonal and honeycomb materials, as described in *2D ferromagnetism at finite temperatures under quantum scrutiny* by *Joren Vanherck, Cihan Bacaksiz, Bart Sorée, Milorad V. Milošević and Wim Magnus*.
    Downloads: 0 This Week
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  • 23
    APBS

    APBS

    Biomolecular electrostatics software

    This software has moved to http://www.poissonboltzmann.org/.
    Downloads: 0 This Week
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  • 24
    PyZgoubi is an interface to the Zgoubi particle tracking code written in python. It aims to ease the use of Zgoubi by providing a simple interface to create beam line elements and particles, and to automate running and analysing of simulations.
    Downloads: 0 This Week
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  • 25
    OpenMultiphysics

    OpenMultiphysics

    Application Integration for HPC Multiphysics

    The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities. Design and development in this project is driven by the Consortium for Open Multiphysics. Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT
    Downloads: 0 This Week
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