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This program has been written having in mind to create an useful tool to evaluate the Motor Evoked Potentials (MEPs) generated by Transcranial Magnetic Stimulation (TMS) and recorded with the program "Signal" (version 2.xx).
PyMaTi is a simple and easy to use GUI for numerical and scientific computing in Python. It surrounds well know packages NumPy and Matplotlib and provides possibility to immediately play with numerical python from intuitive user interface.
Repository of python interfaces to major scientific libraries, like HDF, netCDF and MPI. The interfaces are based on SWIG or PyRex, and should be portable to most Linux/Unix platforms.
FoamBlade provides a complete toolchain for hotwire foam-cutting. FoamBlade currently supports 4-axis hot-wire foamcutting machines that are connected to the parallel port. Generating cut-files from special built DXF-Files is also possible.
pygr is a bioinformatics toolkit for sequence analysis and comparative genomics. pygr is highly scalable (e.g. one can easily query multi-genome alignments) and easy to use. Please see our new project page and wiki at http://code.google.com/p/pygr.
openPC is an integrated toolkit to enable a cluster machine accessible by public over web, and dividing it into blocks consisting of several nodes which each of them is fully controlled by the owners independently.
A set of services to allow for polling remote sites for data, displaying it on the local machine requesting said data, and moving that data anywhere else it needs to go.
Simple application for plotting/processing 1D NMR data. Available for Linux, OS X and Windows and currently reads most Varian and Bruker data. Is capable of producing publication quality plots and exporting data to acsii format.
TransimsGui and makeTransims allow users to automatically generate triptables, timetables and vehicle files, edit individual control files, create batch files for transims feedback processes, run exe-control file pairs and run batch files.
This script analyzes a GPS-tracklog to find the position where digital images were taken. It's main objectives are to embed this position into the EXIF-data and to display the images in Google Earth.
The Serial Data Acquisition is a lightweight data acquisition system able to parse a vast majority of mostly unidirectional streams. Results are saved in a SQLite DB and accessible over XML-RPC or plain HTTP. Its design is modular and easily extendable.
A collection of python scripts to create and handle an XML corpus (a large collection of text for linguistic purpose) from an original Wikipedia database backup dump. It includes a regular expression based parser for the MediaWiki markup language.
MutationFinder is a biomedical natural language processing (NLP) system for extracting mentions of point mutations from free text. MutationFinder achieves high performance (99% precision, 81% recall on blind test data) as an information extraction system
PetriKit is a modular toolkit for Petri Net analysis. It allows the extraction of basic properties, extraction of invariants, and generation of reachability graph. Results can be formatted in plain text, HTML or XML files.
Development of a USB interface library to different USB enabled development (hardware) platforms. Including, but not limited to, FPGA prototype boards.
LabVIEW tools for executing Python Scripts. Includes a Python Script Node and a suite of VIs for executing similar functionality. LabPython palette integrates into user.lib or other palette synch'ed location.